Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC17.41■□□□□ 0.38
NUDCD3Q8IVD9 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC17.41■□□□□ 0.38
NUDCD3Q8IVD9 Z99916.2-201ENST00000604037 246 ntBASIC17.41■□□□□ 0.38
NUDCD3Q8IVD9 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NUDCD3Q8IVD9 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC17.41■□□□□ 0.38
NUDCD3Q8IVD9 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
NUDCD3Q8IVD9 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NUDCD3Q8IVD9 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
NUDCD3Q8IVD9 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
NUDCD3Q8IVD9 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC17.41■□□□□ 0.38
NUDCD3Q8IVD9 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
NUDCD3Q8IVD9 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
NUDCD3Q8IVD9 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC17.41■□□□□ 0.38
NUDCD3Q8IVD9 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
NUDCD3Q8IVD9 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC17.41■□□□□ 0.38
NUDCD3Q8IVD9 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NUDCD3Q8IVD9 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
NUDCD3Q8IVD9 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
NUDCD3Q8IVD9 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
NUDCD3Q8IVD9 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NUDCD3Q8IVD9 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC17.4■□□□□ 0.38
NUDCD3Q8IVD9 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
NUDCD3Q8IVD9 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
NUDCD3Q8IVD9 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NUDCD3Q8IVD9 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
NUDCD3Q8IVD9 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
NUDCD3Q8IVD9 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
NUDCD3Q8IVD9 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NUDCD3Q8IVD9 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC17.4■□□□□ 0.38
NUDCD3Q8IVD9 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
NUDCD3Q8IVD9 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NUDCD3Q8IVD9 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NUDCD3Q8IVD9 HES2-202ENST00000377836 507 ntTSL 2 BASIC17.4■□□□□ 0.38
NUDCD3Q8IVD9 AC098590.1-201ENST00000468126 897 ntBASIC17.4■□□□□ 0.38
NUDCD3Q8IVD9 AC128688.1-201ENST00000487626 519 ntBASIC17.4■□□□□ 0.38
NUDCD3Q8IVD9 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC17.4■□□□□ 0.38
NUDCD3Q8IVD9 EGLN1P1-201ENST00000531623 762 ntBASIC17.4■□□□□ 0.38
NUDCD3Q8IVD9 NEK4P2-201ENST00000580004 1012 ntBASIC17.4■□□□□ 0.38
NUDCD3Q8IVD9 USF2-205ENST00000594064 1179 ntTSL 2 BASIC17.4■□□□□ 0.38
NUDCD3Q8IVD9 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC17.4■□□□□ 0.38
NUDCD3Q8IVD9 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NUDCD3Q8IVD9 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
NUDCD3Q8IVD9 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NUDCD3Q8IVD9 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
NUDCD3Q8IVD9 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
NUDCD3Q8IVD9 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC17.4■□□□□ 0.38
NUDCD3Q8IVD9 MME-217ENST00000616757 1315 ntTSL 5 BASIC17.4■□□□□ 0.38
NUDCD3Q8IVD9 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
NUDCD3Q8IVD9 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NUDCD3Q8IVD9 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC17.4■□□□□ 0.38
NUDCD3Q8IVD9 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC17.4■□□□□ 0.38
NUDCD3Q8IVD9 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
NUDCD3Q8IVD9 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NUDCD3Q8IVD9 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
NUDCD3Q8IVD9 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NUDCD3Q8IVD9 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.38
NUDCD3Q8IVD9 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
NUDCD3Q8IVD9 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC17.39■□□□□ 0.37
NUDCD3Q8IVD9 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NUDCD3Q8IVD9 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC17.39■□□□□ 0.37
NUDCD3Q8IVD9 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC17.39■□□□□ 0.37
NUDCD3Q8IVD9 CES3-203ENST00000543856 3178 ntTSL 2 BASIC17.39■□□□□ 0.37
NUDCD3Q8IVD9 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
NUDCD3Q8IVD9 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NUDCD3Q8IVD9 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.37
NUDCD3Q8IVD9 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC17.39■□□□□ 0.37
NUDCD3Q8IVD9 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
NUDCD3Q8IVD9 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NUDCD3Q8IVD9 Telomerase-vert.1-201ENST00000363312 438 ntBASIC17.39■□□□□ 0.37
NUDCD3Q8IVD9 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC17.39■□□□□ 0.37
NUDCD3Q8IVD9 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
NUDCD3Q8IVD9 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC17.39■□□□□ 0.37
NUDCD3Q8IVD9 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
NUDCD3Q8IVD9 GCSHP5-201ENST00000443090 522 ntBASIC17.39■□□□□ 0.37
NUDCD3Q8IVD9 TSPY20P-201ENST00000450910 630 ntBASIC17.39■□□□□ 0.37
NUDCD3Q8IVD9 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
NUDCD3Q8IVD9 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC17.39■□□□□ 0.37
NUDCD3Q8IVD9 AL512604.3-201ENST00000569583 964 ntBASIC17.39■□□□□ 0.37
NUDCD3Q8IVD9 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
NUDCD3Q8IVD9 AC024563.2-201ENST00000603282 481 ntBASIC17.39■□□□□ 0.37
NUDCD3Q8IVD9 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC17.39■□□□□ 0.37
NUDCD3Q8IVD9 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC17.39■□□□□ 0.37
NUDCD3Q8IVD9 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
NUDCD3Q8IVD9 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC17.39■□□□□ 0.37
NUDCD3Q8IVD9 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
NUDCD3Q8IVD9 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
NUDCD3Q8IVD9 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
NUDCD3Q8IVD9 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
NUDCD3Q8IVD9 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
NUDCD3Q8IVD9 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
NUDCD3Q8IVD9 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NUDCD3Q8IVD9 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NUDCD3Q8IVD9 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
NUDCD3Q8IVD9 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
NUDCD3Q8IVD9 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
NUDCD3Q8IVD9 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC17.38■□□□□ 0.37
NUDCD3Q8IVD9 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
NUDCD3Q8IVD9 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NUDCD3Q8IVD9 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
NUDCD3Q8IVD9 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms