Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC18.64■□□□□ 0.57
NPAS4Q8IUM7 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
NPAS4Q8IUM7 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
NPAS4Q8IUM7 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC18.64■□□□□ 0.57
NPAS4Q8IUM7 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.57
NPAS4Q8IUM7 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC18.64■□□□□ 0.57
NPAS4Q8IUM7 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
NPAS4Q8IUM7 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
NPAS4Q8IUM7 AC092919.2-201ENST00000623631 1645 ntBASIC18.63■□□□□ 0.57
NPAS4Q8IUM7 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC18.63■□□□□ 0.57
NPAS4Q8IUM7 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NPAS4Q8IUM7 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC18.63■□□□□ 0.57
NPAS4Q8IUM7 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC18.63■□□□□ 0.57
NPAS4Q8IUM7 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
NPAS4Q8IUM7 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
NPAS4Q8IUM7 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NPAS4Q8IUM7 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NPAS4Q8IUM7 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
NPAS4Q8IUM7 FALEC-201ENST00000416894 566 ntTSL 3 BASIC18.63■□□□□ 0.57
NPAS4Q8IUM7 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC18.63■□□□□ 0.57
NPAS4Q8IUM7 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC18.63■□□□□ 0.57
NPAS4Q8IUM7 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC18.63■□□□□ 0.57
NPAS4Q8IUM7 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
NPAS4Q8IUM7 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
NPAS4Q8IUM7 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
NPAS4Q8IUM7 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC18.63■□□□□ 0.57
NPAS4Q8IUM7 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC18.63■□□□□ 0.57
NPAS4Q8IUM7 LSM12-202ENST00000585388 942 ntTSL 3 BASIC18.63■□□□□ 0.57
NPAS4Q8IUM7 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NPAS4Q8IUM7 AC129492.6-201ENST00000611383 1305 ntBASIC18.63■□□□□ 0.57
NPAS4Q8IUM7 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
NPAS4Q8IUM7 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NPAS4Q8IUM7 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
NPAS4Q8IUM7 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
NPAS4Q8IUM7 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NPAS4Q8IUM7 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
NPAS4Q8IUM7 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
NPAS4Q8IUM7 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
NPAS4Q8IUM7 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC18.62■□□□□ 0.57
NPAS4Q8IUM7 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NPAS4Q8IUM7 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NPAS4Q8IUM7 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
NPAS4Q8IUM7 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
NPAS4Q8IUM7 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
NPAS4Q8IUM7 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NPAS4Q8IUM7 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
NPAS4Q8IUM7 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
NPAS4Q8IUM7 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NPAS4Q8IUM7 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC18.62■□□□□ 0.57
NPAS4Q8IUM7 AC087163.2-201ENST00000457299 853 ntBASIC18.62■□□□□ 0.57
NPAS4Q8IUM7 HLA-J-203ENST00000494367 1087 ntBASIC18.62■□□□□ 0.57
NPAS4Q8IUM7 SLC25A6P2-201ENST00000497974 877 ntBASIC18.62■□□□□ 0.57
NPAS4Q8IUM7 NMU-203ENST00000507338 658 ntTSL 3 BASIC18.62■□□□□ 0.57
NPAS4Q8IUM7 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
NPAS4Q8IUM7 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
NPAS4Q8IUM7 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC18.62■□□□□ 0.57
NPAS4Q8IUM7 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NPAS4Q8IUM7 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC18.62■□□□□ 0.57
NPAS4Q8IUM7 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC18.62■□□□□ 0.57
NPAS4Q8IUM7 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
NPAS4Q8IUM7 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NPAS4Q8IUM7 REXO1L11P-201ENST00000620964 1927 ntBASIC18.62■□□□□ 0.57
NPAS4Q8IUM7 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
NPAS4Q8IUM7 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
NPAS4Q8IUM7 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
NPAS4Q8IUM7 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NPAS4Q8IUM7 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NPAS4Q8IUM7 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
NPAS4Q8IUM7 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NPAS4Q8IUM7 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
NPAS4Q8IUM7 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NPAS4Q8IUM7 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
NPAS4Q8IUM7 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
NPAS4Q8IUM7 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
NPAS4Q8IUM7 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
NPAS4Q8IUM7 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NPAS4Q8IUM7 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
NPAS4Q8IUM7 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
NPAS4Q8IUM7 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NPAS4Q8IUM7 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
NPAS4Q8IUM7 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
NPAS4Q8IUM7 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
NPAS4Q8IUM7 CYP51A1P2-201ENST00000419457 1499 ntBASIC18.61■□□□□ 0.57
NPAS4Q8IUM7 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NPAS4Q8IUM7 AC002056.1-201ENST00000395613 760 ntBASIC18.61■□□□□ 0.57
NPAS4Q8IUM7 AC023141.5-201ENST00000458585 616 ntBASIC18.61■□□□□ 0.57
NPAS4Q8IUM7 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC18.61■□□□□ 0.57
NPAS4Q8IUM7 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
NPAS4Q8IUM7 IGHV3OR16-6-201ENST00000568775 360 ntBASIC18.61■□□□□ 0.57
NPAS4Q8IUM7 AL139327.4-201ENST00000612362 153 ntBASIC18.61■□□□□ 0.57
NPAS4Q8IUM7 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.61■□□□□ 0.57
NPAS4Q8IUM7 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
NPAS4Q8IUM7 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
NPAS4Q8IUM7 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NPAS4Q8IUM7 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NPAS4Q8IUM7 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NPAS4Q8IUM7 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC18.61■□□□□ 0.57
NPAS4Q8IUM7 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC18.6■□□□□ 0.57
NPAS4Q8IUM7 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NPAS4Q8IUM7 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms