Protein–RNA interactions for Protein: Q86YS6

RAB43, Ras-related protein Rab-43, humanhuman

Predictions only

Length 212 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43Q86YS6 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC16.75■□□□□ 0.27
RAB43Q86YS6 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC16.75■□□□□ 0.27
RAB43Q86YS6 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RAB43Q86YS6 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RAB43Q86YS6 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RAB43Q86YS6 IL9RP2-201ENST00000423948 1312 ntBASIC16.74■□□□□ 0.27
RAB43Q86YS6 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RAB43Q86YS6 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
RAB43Q86YS6 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC16.74■□□□□ 0.27
RAB43Q86YS6 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RAB43Q86YS6 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
RAB43Q86YS6 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
RAB43Q86YS6 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RAB43Q86YS6 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RAB43Q86YS6 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC16.74■□□□□ 0.27
RAB43Q86YS6 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC16.74■□□□□ 0.27
RAB43Q86YS6 RNPS1P1-201ENST00000507437 918 ntBASIC16.74■□□□□ 0.27
RAB43Q86YS6 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC16.74■□□□□ 0.27
RAB43Q86YS6 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC16.74■□□□□ 0.27
RAB43Q86YS6 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC16.74■□□□□ 0.27
RAB43Q86YS6 LINC00896-202ENST00000609602 2128 ntBASIC16.74■□□□□ 0.27
RAB43Q86YS6 AP001269.4-201ENST00000609611 512 ntBASIC16.74■□□□□ 0.27
RAB43Q86YS6 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC16.74■□□□□ 0.27
RAB43Q86YS6 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RAB43Q86YS6 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.74■□□□□ 0.27
RAB43Q86YS6 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
RAB43Q86YS6 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RAB43Q86YS6 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RAB43Q86YS6 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RAB43Q86YS6 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RAB43Q86YS6 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC16.74■□□□□ 0.27
RAB43Q86YS6 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC16.74■□□□□ 0.27
RAB43Q86YS6 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC16.74■□□□□ 0.27
RAB43Q86YS6 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
RAB43Q86YS6 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC16.74■□□□□ 0.27
RAB43Q86YS6 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RAB43Q86YS6 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
RAB43Q86YS6 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RAB43Q86YS6 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RAB43Q86YS6 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC16.74■□□□□ 0.27
RAB43Q86YS6 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
RAB43Q86YS6 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
RAB43Q86YS6 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC16.73■□□□□ 0.27
RAB43Q86YS6 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC16.73■□□□□ 0.27
RAB43Q86YS6 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC16.73■□□□□ 0.27
RAB43Q86YS6 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
RAB43Q86YS6 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RAB43Q86YS6 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
RAB43Q86YS6 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RAB43Q86YS6 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC16.73■□□□□ 0.27
RAB43Q86YS6 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RAB43Q86YS6 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
RAB43Q86YS6 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
RAB43Q86YS6 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RAB43Q86YS6 PMS2P1-201ENST00000431037 1228 ntBASIC16.73■□□□□ 0.27
RAB43Q86YS6 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC16.73■□□□□ 0.27
RAB43Q86YS6 ABCD1P5-201ENST00000445663 754 ntBASIC16.73■□□□□ 0.27
RAB43Q86YS6 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC16.73■□□□□ 0.27
RAB43Q86YS6 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
RAB43Q86YS6 AC018712.1-201ENST00000455767 687 ntBASIC16.73■□□□□ 0.27
RAB43Q86YS6 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC16.73■□□□□ 0.27
RAB43Q86YS6 AC023511.2-201ENST00000618803 211 ntBASIC16.73■□□□□ 0.27
RAB43Q86YS6 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
RAB43Q86YS6 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RAB43Q86YS6 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RAB43Q86YS6 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
RAB43Q86YS6 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RAB43Q86YS6 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC16.73■□□□□ 0.27
RAB43Q86YS6 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RAB43Q86YS6 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RAB43Q86YS6 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC16.73■□□□□ 0.27
RAB43Q86YS6 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RAB43Q86YS6 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RAB43Q86YS6 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
RAB43Q86YS6 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RAB43Q86YS6 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
RAB43Q86YS6 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RAB43Q86YS6 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RAB43Q86YS6 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RAB43Q86YS6 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC16.72■□□□□ 0.27
RAB43Q86YS6 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
RAB43Q86YS6 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RAB43Q86YS6 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC16.72■□□□□ 0.27
RAB43Q86YS6 CTNS-203ENST00000399306 803 ntTSL 3 BASIC16.72■□□□□ 0.27
RAB43Q86YS6 SRP19-202ENST00000445150 833 ntTSL 2 BASIC16.72■□□□□ 0.27
RAB43Q86YS6 RBSN-204ENST00000449050 903 ntTSL 2 BASIC16.72■□□□□ 0.27
RAB43Q86YS6 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
RAB43Q86YS6 RNA5SP419-201ENST00000515908 135 ntBASIC16.72■□□□□ 0.27
RAB43Q86YS6 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC16.72■□□□□ 0.27
RAB43Q86YS6 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC16.72■□□□□ 0.27
RAB43Q86YS6 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC16.72■□□□□ 0.27
RAB43Q86YS6 PRKN-208ENST00000610470 531 ntTSL 2 BASIC16.72■□□□□ 0.27
RAB43Q86YS6 PRKN-209ENST00000612485 225 ntTSL 5 BASIC16.72■□□□□ 0.27
RAB43Q86YS6 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC16.72■□□□□ 0.27
RAB43Q86YS6 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC16.72■□□□□ 0.27
RAB43Q86YS6 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RAB43Q86YS6 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RAB43Q86YS6 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC16.72■□□□□ 0.27
RAB43Q86YS6 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RAB43Q86YS6 AC073592.3-201ENST00000625118 1834 ntBASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms