Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
COL23A1Q86Y22 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC21.74■■□□□ 1.07
COL23A1Q86Y22 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
COL23A1Q86Y22 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
COL23A1Q86Y22 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
COL23A1Q86Y22 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
COL23A1Q86Y22 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
COL23A1Q86Y22 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC21.74■■□□□ 1.07
COL23A1Q86Y22 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC21.74■■□□□ 1.07
COL23A1Q86Y22 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
COL23A1Q86Y22 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
COL23A1Q86Y22 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
COL23A1Q86Y22 U91328.1-201ENST00000437528 223 ntBASIC21.74■■□□□ 1.07
COL23A1Q86Y22 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC21.74■■□□□ 1.07
COL23A1Q86Y22 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC21.74■■□□□ 1.07
COL23A1Q86Y22 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC21.74■■□□□ 1.07
COL23A1Q86Y22 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC21.74■■□□□ 1.07
COL23A1Q86Y22 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC21.74■■□□□ 1.07
COL23A1Q86Y22 SSH2-211ENST00000590153 570 ntTSL 4 BASIC21.74■■□□□ 1.07
COL23A1Q86Y22 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC21.74■■□□□ 1.07
COL23A1Q86Y22 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
COL23A1Q86Y22 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
COL23A1Q86Y22 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
COL23A1Q86Y22 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
COL23A1Q86Y22 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
COL23A1Q86Y22 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC21.74■■□□□ 1.07
COL23A1Q86Y22 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
COL23A1Q86Y22 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC21.73■■□□□ 1.07
COL23A1Q86Y22 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
COL23A1Q86Y22 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
COL23A1Q86Y22 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
COL23A1Q86Y22 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
COL23A1Q86Y22 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC21.73■■□□□ 1.07
COL23A1Q86Y22 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC21.73■■□□□ 1.07
COL23A1Q86Y22 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC21.73■■□□□ 1.07
COL23A1Q86Y22 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC21.73■■□□□ 1.07
COL23A1Q86Y22 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
COL23A1Q86Y22 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
COL23A1Q86Y22 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
COL23A1Q86Y22 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC21.73■■□□□ 1.07
COL23A1Q86Y22 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
COL23A1Q86Y22 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC21.72■■□□□ 1.07
COL23A1Q86Y22 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
COL23A1Q86Y22 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
COL23A1Q86Y22 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
COL23A1Q86Y22 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC21.72■■□□□ 1.07
COL23A1Q86Y22 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
COL23A1Q86Y22 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC21.72■■□□□ 1.07
COL23A1Q86Y22 AL031598.1-201ENST00000561511 1773 ntBASIC21.72■■□□□ 1.07
COL23A1Q86Y22 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC21.72■■□□□ 1.07
COL23A1Q86Y22 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC21.72■■□□□ 1.07
COL23A1Q86Y22 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC21.72■■□□□ 1.07
COL23A1Q86Y22 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
COL23A1Q86Y22 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
COL23A1Q86Y22 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC21.72■■□□□ 1.07
COL23A1Q86Y22 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
COL23A1Q86Y22 CD81-202ENST00000381036 880 ntTSL 3 BASIC21.72■■□□□ 1.07
COL23A1Q86Y22 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC21.72■■□□□ 1.07
COL23A1Q86Y22 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC21.72■■□□□ 1.07
COL23A1Q86Y22 ALG1L8P-201ENST00000533887 760 ntBASIC21.72■■□□□ 1.07
COL23A1Q86Y22 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC21.72■■□□□ 1.07
COL23A1Q86Y22 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC21.72■■□□□ 1.07
COL23A1Q86Y22 AC009118.2-201ENST00000613275 655 ntBASIC21.72■■□□□ 1.07
COL23A1Q86Y22 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC21.72■■□□□ 1.07
COL23A1Q86Y22 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
COL23A1Q86Y22 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
COL23A1Q86Y22 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
COL23A1Q86Y22 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC21.72■■□□□ 1.07
COL23A1Q86Y22 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
COL23A1Q86Y22 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC21.71■■□□□ 1.07
COL23A1Q86Y22 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
COL23A1Q86Y22 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC21.71■■□□□ 1.07
COL23A1Q86Y22 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
COL23A1Q86Y22 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
COL23A1Q86Y22 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
COL23A1Q86Y22 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC21.71■■□□□ 1.07
COL23A1Q86Y22 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC21.71■■□□□ 1.07
COL23A1Q86Y22 TSSK5P-201ENST00000423978 907 ntBASIC21.71■■□□□ 1.07
COL23A1Q86Y22 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
COL23A1Q86Y22 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC21.71■■□□□ 1.07
COL23A1Q86Y22 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC21.71■■□□□ 1.07
COL23A1Q86Y22 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC21.71■■□□□ 1.07
COL23A1Q86Y22 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
COL23A1Q86Y22 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
COL23A1Q86Y22 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
COL23A1Q86Y22 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC21.71■■□□□ 1.07
COL23A1Q86Y22 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
COL23A1Q86Y22 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
COL23A1Q86Y22 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
COL23A1Q86Y22 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
COL23A1Q86Y22 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
COL23A1Q86Y22 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
COL23A1Q86Y22 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
COL23A1Q86Y22 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC21.7■■□□□ 1.07
COL23A1Q86Y22 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
COL23A1Q86Y22 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC21.7■■□□□ 1.06
COL23A1Q86Y22 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
COL23A1Q86Y22 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
COL23A1Q86Y22 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
COL23A1Q86Y22 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms