Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRIM50Q86XT4 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRIM50Q86XT4 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRIM50Q86XT4 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC19.48■□□□□ 0.71
TRIM50Q86XT4 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC19.48■□□□□ 0.71
TRIM50Q86XT4 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TRIM50Q86XT4 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRIM50Q86XT4 YBX2P1-201ENST00000394192 760 ntBASIC19.48■□□□□ 0.71
TRIM50Q86XT4 SLC4A1APP2-201ENST00000424054 1259 ntBASIC19.48■□□□□ 0.71
TRIM50Q86XT4 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC19.48■□□□□ 0.71
TRIM50Q86XT4 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC19.48■□□□□ 0.71
TRIM50Q86XT4 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRIM50Q86XT4 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRIM50Q86XT4 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC19.48■□□□□ 0.71
TRIM50Q86XT4 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC19.47■□□□□ 0.71
TRIM50Q86XT4 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
TRIM50Q86XT4 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TRIM50Q86XT4 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRIM50Q86XT4 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC19.47■□□□□ 0.71
TRIM50Q86XT4 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TRIM50Q86XT4 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC19.47■□□□□ 0.71
TRIM50Q86XT4 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TRIM50Q86XT4 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC19.47■□□□□ 0.71
TRIM50Q86XT4 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TRIM50Q86XT4 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRIM50Q86XT4 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
TRIM50Q86XT4 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRIM50Q86XT4 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC19.47■□□□□ 0.71
TRIM50Q86XT4 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC19.47■□□□□ 0.71
TRIM50Q86XT4 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
TRIM50Q86XT4 FIS1-203ENST00000442303 631 ntTSL 3 BASIC19.47■□□□□ 0.71
TRIM50Q86XT4 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
TRIM50Q86XT4 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC19.47■□□□□ 0.71
TRIM50Q86XT4 AC040169.1-201ENST00000565382 521 ntBASIC19.47■□□□□ 0.71
TRIM50Q86XT4 MNT-208ENST00000575394 606 ntTSL 4 BASIC19.47■□□□□ 0.71
TRIM50Q86XT4 MIR4751-201ENST00000578027 74 ntBASIC19.47■□□□□ 0.71
TRIM50Q86XT4 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC19.47■□□□□ 0.71
TRIM50Q86XT4 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRIM50Q86XT4 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
TRIM50Q86XT4 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC19.47■□□□□ 0.71
TRIM50Q86XT4 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TRIM50Q86XT4 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRIM50Q86XT4 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
TRIM50Q86XT4 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC19.47■□□□□ 0.71
TRIM50Q86XT4 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TRIM50Q86XT4 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRIM50Q86XT4 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRIM50Q86XT4 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC19.47■□□□□ 0.71
TRIM50Q86XT4 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRIM50Q86XT4 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
TRIM50Q86XT4 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TRIM50Q86XT4 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRIM50Q86XT4 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRIM50Q86XT4 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC19.47■□□□□ 0.71
TRIM50Q86XT4 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRIM50Q86XT4 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRIM50Q86XT4 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC19.47■□□□□ 0.71
TRIM50Q86XT4 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC19.47■□□□□ 0.71
TRIM50Q86XT4 COMP-202ENST00000425807 2292 ntTSL 2 BASIC19.46■□□□□ 0.71
TRIM50Q86XT4 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC19.46■□□□□ 0.71
TRIM50Q86XT4 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRIM50Q86XT4 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TRIM50Q86XT4 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRIM50Q86XT4 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRIM50Q86XT4 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC19.46■□□□□ 0.71
TRIM50Q86XT4 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
TRIM50Q86XT4 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TRIM50Q86XT4 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TRIM50Q86XT4 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC19.46■□□□□ 0.71
TRIM50Q86XT4 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC19.46■□□□□ 0.71
TRIM50Q86XT4 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC19.46■□□□□ 0.71
TRIM50Q86XT4 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
TRIM50Q86XT4 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRIM50Q86XT4 AC005104.2-201ENST00000427818 678 ntBASIC19.46■□□□□ 0.71
TRIM50Q86XT4 GPX1P2-201ENST00000429271 606 ntBASIC19.46■□□□□ 0.71
TRIM50Q86XT4 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC19.46■□□□□ 0.71
TRIM50Q86XT4 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC19.46■□□□□ 0.71
TRIM50Q86XT4 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC19.46■□□□□ 0.71
TRIM50Q86XT4 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC19.46■□□□□ 0.71
TRIM50Q86XT4 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC19.46■□□□□ 0.71
TRIM50Q86XT4 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TRIM50Q86XT4 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRIM50Q86XT4 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TRIM50Q86XT4 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC19.46■□□□□ 0.71
TRIM50Q86XT4 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
TRIM50Q86XT4 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
TRIM50Q86XT4 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TRIM50Q86XT4 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC19.46■□□□□ 0.71
TRIM50Q86XT4 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRIM50Q86XT4 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC19.45■□□□□ 0.7
TRIM50Q86XT4 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC19.45■□□□□ 0.7
TRIM50Q86XT4 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TRIM50Q86XT4 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRIM50Q86XT4 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRIM50Q86XT4 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC19.45■□□□□ 0.7
TRIM50Q86XT4 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC19.45■□□□□ 0.7
TRIM50Q86XT4 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC19.45■□□□□ 0.7
TRIM50Q86XT4 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
TRIM50Q86XT4 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC19.45■□□□□ 0.7
TRIM50Q86XT4 AC026471.1-201ENST00000564629 3026 ntBASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms