Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PTCHD4Q6ZW05 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
PTCHD4Q6ZW05 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
PTCHD4Q6ZW05 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC16.13■□□□□ 0.17
PTCHD4Q6ZW05 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PTCHD4Q6ZW05 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PTCHD4Q6ZW05 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PTCHD4Q6ZW05 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
PTCHD4Q6ZW05 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC16.13■□□□□ 0.17
PTCHD4Q6ZW05 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
PTCHD4Q6ZW05 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC16.13■□□□□ 0.17
PTCHD4Q6ZW05 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC16.13■□□□□ 0.17
PTCHD4Q6ZW05 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC16.13■□□□□ 0.17
PTCHD4Q6ZW05 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC16.13■□□□□ 0.17
PTCHD4Q6ZW05 GPX4-207ENST00000589115 812 ntTSL 2 BASIC16.13■□□□□ 0.17
PTCHD4Q6ZW05 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
PTCHD4Q6ZW05 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PTCHD4Q6ZW05 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC16.13■□□□□ 0.17
PTCHD4Q6ZW05 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PTCHD4Q6ZW05 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC16.13■□□□□ 0.17
PTCHD4Q6ZW05 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC16.13■□□□□ 0.17
PTCHD4Q6ZW05 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PTCHD4Q6ZW05 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PTCHD4Q6ZW05 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PTCHD4Q6ZW05 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PTCHD4Q6ZW05 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PTCHD4Q6ZW05 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
PTCHD4Q6ZW05 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PTCHD4Q6ZW05 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PTCHD4Q6ZW05 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC16.13■□□□□ 0.17
PTCHD4Q6ZW05 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PTCHD4Q6ZW05 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC16.13■□□□□ 0.17
PTCHD4Q6ZW05 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PTCHD4Q6ZW05 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC16.13■□□□□ 0.17
PTCHD4Q6ZW05 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PTCHD4Q6ZW05 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
PTCHD4Q6ZW05 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
PTCHD4Q6ZW05 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PTCHD4Q6ZW05 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC16.12■□□□□ 0.17
PTCHD4Q6ZW05 LINC00167-201ENST00000530583 1419 ntBASIC16.12■□□□□ 0.17
PTCHD4Q6ZW05 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PTCHD4Q6ZW05 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PTCHD4Q6ZW05 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PTCHD4Q6ZW05 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PTCHD4Q6ZW05 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PTCHD4Q6ZW05 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC16.12■□□□□ 0.17
PTCHD4Q6ZW05 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC16.12■□□□□ 0.17
PTCHD4Q6ZW05 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PTCHD4Q6ZW05 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PTCHD4Q6ZW05 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC16.12■□□□□ 0.17
PTCHD4Q6ZW05 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC16.12■□□□□ 0.17
PTCHD4Q6ZW05 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC16.12■□□□□ 0.17
PTCHD4Q6ZW05 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC16.12■□□□□ 0.17
PTCHD4Q6ZW05 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC16.12■□□□□ 0.17
PTCHD4Q6ZW05 AC093827.2-201ENST00000512654 315 ntBASIC16.12■□□□□ 0.17
PTCHD4Q6ZW05 TMA16-209ENST00000513272 803 ntTSL 2 BASIC16.12■□□□□ 0.17
PTCHD4Q6ZW05 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC16.12■□□□□ 0.17
PTCHD4Q6ZW05 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC16.12■□□□□ 0.17
PTCHD4Q6ZW05 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PTCHD4Q6ZW05 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PTCHD4Q6ZW05 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PTCHD4Q6ZW05 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PTCHD4Q6ZW05 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
PTCHD4Q6ZW05 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
PTCHD4Q6ZW05 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PTCHD4Q6ZW05 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
PTCHD4Q6ZW05 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PTCHD4Q6ZW05 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC16.12■□□□□ 0.17
PTCHD4Q6ZW05 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PTCHD4Q6ZW05 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PTCHD4Q6ZW05 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PTCHD4Q6ZW05 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC16.12■□□□□ 0.17
PTCHD4Q6ZW05 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PTCHD4Q6ZW05 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
PTCHD4Q6ZW05 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PTCHD4Q6ZW05 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
PTCHD4Q6ZW05 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PTCHD4Q6ZW05 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PTCHD4Q6ZW05 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
PTCHD4Q6ZW05 AC060834.1-201ENST00000443027 2032 ntBASIC16.11■□□□□ 0.17
PTCHD4Q6ZW05 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PTCHD4Q6ZW05 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
PTCHD4Q6ZW05 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
PTCHD4Q6ZW05 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
PTCHD4Q6ZW05 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
PTCHD4Q6ZW05 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PTCHD4Q6ZW05 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PTCHD4Q6ZW05 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC16.11■□□□□ 0.17
PTCHD4Q6ZW05 PVRIG2P-201ENST00000435460 978 ntBASIC16.11■□□□□ 0.17
PTCHD4Q6ZW05 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PTCHD4Q6ZW05 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC16.11■□□□□ 0.17
PTCHD4Q6ZW05 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC16.11■□□□□ 0.17
PTCHD4Q6ZW05 CLN6-221ENST00000637494 765 ntTSL 5 BASIC16.11■□□□□ 0.17
PTCHD4Q6ZW05 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PTCHD4Q6ZW05 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PTCHD4Q6ZW05 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PTCHD4Q6ZW05 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
PTCHD4Q6ZW05 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
PTCHD4Q6ZW05 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PTCHD4Q6ZW05 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms