Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC20.32■□□□□ 0.84
SHROOM1Q2M3G4 RHOQP3-201ENST00000437982 621 ntBASIC20.32■□□□□ 0.84
SHROOM1Q2M3G4 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC20.32■□□□□ 0.84
SHROOM1Q2M3G4 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC20.32■□□□□ 0.84
SHROOM1Q2M3G4 AC096734.2-201ENST00000562054 433 ntBASIC20.32■□□□□ 0.84
SHROOM1Q2M3G4 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC20.32■□□□□ 0.84
SHROOM1Q2M3G4 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
SHROOM1Q2M3G4 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SHROOM1Q2M3G4 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC20.32■□□□□ 0.84
SHROOM1Q2M3G4 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
SHROOM1Q2M3G4 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
SHROOM1Q2M3G4 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC20.32■□□□□ 0.84
SHROOM1Q2M3G4 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC20.32■□□□□ 0.84
SHROOM1Q2M3G4 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SHROOM1Q2M3G4 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SHROOM1Q2M3G4 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SHROOM1Q2M3G4 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC20.31■□□□□ 0.84
SHROOM1Q2M3G4 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC20.31■□□□□ 0.84
SHROOM1Q2M3G4 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SHROOM1Q2M3G4 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SHROOM1Q2M3G4 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SHROOM1Q2M3G4 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
SHROOM1Q2M3G4 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC20.31■□□□□ 0.84
SHROOM1Q2M3G4 AC006116.8-202ENST00000587620 1550 ntBASIC20.31■□□□□ 0.84
SHROOM1Q2M3G4 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
SHROOM1Q2M3G4 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
SHROOM1Q2M3G4 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
SHROOM1Q2M3G4 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SHROOM1Q2M3G4 MYCLP1-201ENST00000372451 1075 ntBASIC20.31■□□□□ 0.84
SHROOM1Q2M3G4 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SHROOM1Q2M3G4 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC20.31■□□□□ 0.84
SHROOM1Q2M3G4 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC20.31■□□□□ 0.84
SHROOM1Q2M3G4 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC20.31■□□□□ 0.84
SHROOM1Q2M3G4 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC20.31■□□□□ 0.84
SHROOM1Q2M3G4 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC20.31■□□□□ 0.84
SHROOM1Q2M3G4 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SHROOM1Q2M3G4 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC20.31■□□□□ 0.84
SHROOM1Q2M3G4 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SHROOM1Q2M3G4 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SHROOM1Q2M3G4 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SHROOM1Q2M3G4 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SHROOM1Q2M3G4 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SHROOM1Q2M3G4 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
SHROOM1Q2M3G4 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SHROOM1Q2M3G4 AC092919.2-201ENST00000623631 1645 ntBASIC20.31■□□□□ 0.84
SHROOM1Q2M3G4 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SHROOM1Q2M3G4 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC20.31■□□□□ 0.84
SHROOM1Q2M3G4 LINC00304-203ENST00000565008 1864 ntBASIC20.3■□□□□ 0.84
SHROOM1Q2M3G4 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC20.3■□□□□ 0.84
SHROOM1Q2M3G4 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SHROOM1Q2M3G4 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC20.3■□□□□ 0.84
SHROOM1Q2M3G4 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SHROOM1Q2M3G4 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SHROOM1Q2M3G4 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC20.3■□□□□ 0.84
SHROOM1Q2M3G4 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SHROOM1Q2M3G4 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
SHROOM1Q2M3G4 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC20.3■□□□□ 0.84
SHROOM1Q2M3G4 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC20.3■□□□□ 0.84
SHROOM1Q2M3G4 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SHROOM1Q2M3G4 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC20.3■□□□□ 0.84
SHROOM1Q2M3G4 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC20.3■□□□□ 0.84
SHROOM1Q2M3G4 ACTG1P4-201ENST00000425123 1122 ntBASIC20.3■□□□□ 0.84
SHROOM1Q2M3G4 METTL21AP1-201ENST00000438852 635 ntBASIC20.3■□□□□ 0.84
SHROOM1Q2M3G4 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SHROOM1Q2M3G4 SLC25A6P2-201ENST00000497974 877 ntBASIC20.3■□□□□ 0.84
SHROOM1Q2M3G4 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC20.3■□□□□ 0.84
SHROOM1Q2M3G4 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SHROOM1Q2M3G4 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
SHROOM1Q2M3G4 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC20.3■□□□□ 0.84
SHROOM1Q2M3G4 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
SHROOM1Q2M3G4 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SHROOM1Q2M3G4 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SHROOM1Q2M3G4 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SHROOM1Q2M3G4 AC135050.7-201ENST00000624508 2218 ntBASIC20.3■□□□□ 0.84
SHROOM1Q2M3G4 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC20.3■□□□□ 0.84
SHROOM1Q2M3G4 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC20.3■□□□□ 0.84
SHROOM1Q2M3G4 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
SHROOM1Q2M3G4 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SHROOM1Q2M3G4 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SHROOM1Q2M3G4 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SHROOM1Q2M3G4 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SHROOM1Q2M3G4 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SHROOM1Q2M3G4 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
SHROOM1Q2M3G4 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SHROOM1Q2M3G4 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SHROOM1Q2M3G4 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
SHROOM1Q2M3G4 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SHROOM1Q2M3G4 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SHROOM1Q2M3G4 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SHROOM1Q2M3G4 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SHROOM1Q2M3G4 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
SHROOM1Q2M3G4 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SHROOM1Q2M3G4 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SHROOM1Q2M3G4 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SHROOM1Q2M3G4 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC20.29■□□□□ 0.84
SHROOM1Q2M3G4 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC20.29■□□□□ 0.84
SHROOM1Q2M3G4 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
SHROOM1Q2M3G4 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
SHROOM1Q2M3G4 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
SHROOM1Q2M3G4 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC20.29■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms