Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PCDH1Q08174 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDH1Q08174 KRT17P6-201ENST00000453795 1220 ntBASIC16.89■□□□□ 0.29
PCDH1Q08174 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC16.89■□□□□ 0.29
PCDH1Q08174 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC16.89■□□□□ 0.29
PCDH1Q08174 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDH1Q08174 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC16.89■□□□□ 0.29
PCDH1Q08174 AP002414.4-201ENST00000589764 1148 ntBASIC16.89■□□□□ 0.29
PCDH1Q08174 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC16.89■□□□□ 0.29
PCDH1Q08174 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDH1Q08174 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDH1Q08174 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDH1Q08174 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
PCDH1Q08174 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PCDH1Q08174 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDH1Q08174 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDH1Q08174 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDH1Q08174 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDH1Q08174 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
PCDH1Q08174 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDH1Q08174 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDH1Q08174 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDH1Q08174 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDH1Q08174 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDH1Q08174 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PCDH1Q08174 KRT8P10-201ENST00000450021 1447 ntBASIC16.88■□□□□ 0.29
PCDH1Q08174 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDH1Q08174 INTS4P1-201ENST00000438455 1935 ntBASIC16.88■□□□□ 0.29
PCDH1Q08174 TP73-AS1-210ENST00000637775 1455 ntBASIC16.88■□□□□ 0.29
PCDH1Q08174 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC16.88■□□□□ 0.29
PCDH1Q08174 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDH1Q08174 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC16.88■□□□□ 0.29
PCDH1Q08174 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PCDH1Q08174 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
PCDH1Q08174 POM121L3P-201ENST00000419331 1163 ntBASIC16.88■□□□□ 0.29
PCDH1Q08174 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC16.88■□□□□ 0.29
PCDH1Q08174 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC16.88■□□□□ 0.29
PCDH1Q08174 AC111152.3-201ENST00000569699 673 ntBASIC16.88■□□□□ 0.29
PCDH1Q08174 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDH1Q08174 AL358472.4-201ENST00000633140 710 ntBASIC16.88■□□□□ 0.29
PCDH1Q08174 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC16.88■□□□□ 0.29
PCDH1Q08174 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDH1Q08174 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDH1Q08174 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PCDH1Q08174 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDH1Q08174 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC16.88■□□□□ 0.29
PCDH1Q08174 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC16.88■□□□□ 0.29
PCDH1Q08174 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC16.88■□□□□ 0.29
PCDH1Q08174 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC16.88■□□□□ 0.29
PCDH1Q08174 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
PCDH1Q08174 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDH1Q08174 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC16.88■□□□□ 0.29
PCDH1Q08174 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDH1Q08174 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PCDH1Q08174 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDH1Q08174 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
PCDH1Q08174 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PCDH1Q08174 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC16.87■□□□□ 0.29
PCDH1Q08174 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDH1Q08174 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDH1Q08174 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDH1Q08174 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDH1Q08174 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
PCDH1Q08174 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDH1Q08174 AP001094.4-201ENST00000579008 2176 ntBASIC16.87■□□□□ 0.29
PCDH1Q08174 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDH1Q08174 SLC25A1P3-201ENST00000395415 828 ntBASIC16.87■□□□□ 0.29
PCDH1Q08174 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PCDH1Q08174 RNF146-204ENST00000476956 884 ntTSL 2 BASIC16.87■□□□□ 0.29
PCDH1Q08174 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC16.87■□□□□ 0.29
PCDH1Q08174 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC16.87■□□□□ 0.29
PCDH1Q08174 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
PCDH1Q08174 BNIP3P18-201ENST00000593976 575 ntBASIC16.87■□□□□ 0.29
PCDH1Q08174 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PCDH1Q08174 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
PCDH1Q08174 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
PCDH1Q08174 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDH1Q08174 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC16.87■□□□□ 0.29
PCDH1Q08174 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDH1Q08174 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
PCDH1Q08174 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDH1Q08174 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PCDH1Q08174 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDH1Q08174 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PCDH1Q08174 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC16.86■□□□□ 0.29
PCDH1Q08174 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PCDH1Q08174 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
PCDH1Q08174 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDH1Q08174 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDH1Q08174 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC16.86■□□□□ 0.29
PCDH1Q08174 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDH1Q08174 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PCDH1Q08174 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
PCDH1Q08174 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC16.86■□□□□ 0.29
PCDH1Q08174 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDH1Q08174 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDH1Q08174 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
PCDH1Q08174 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC16.86■□□□□ 0.29
PCDH1Q08174 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
PCDH1Q08174 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms