Protein–RNA interactions for Protein: Q04323

UBXN1, UBX domain-containing protein 1, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1Q04323 AC005332.3-201ENST00000589904 676 ntBASIC19.18■□□□□ 0.66
UBXN1Q04323 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
UBXN1Q04323 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC19.18■□□□□ 0.66
UBXN1Q04323 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC19.18■□□□□ 0.66
UBXN1Q04323 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
UBXN1Q04323 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
UBXN1Q04323 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
UBXN1Q04323 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC19.18■□□□□ 0.66
UBXN1Q04323 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
UBXN1Q04323 AL118508.1-201ENST00000613502 2345 ntBASIC19.18■□□□□ 0.66
UBXN1Q04323 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
UBXN1Q04323 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
UBXN1Q04323 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
UBXN1Q04323 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
UBXN1Q04323 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
UBXN1Q04323 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC19.17■□□□□ 0.66
UBXN1Q04323 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC19.17■□□□□ 0.66
UBXN1Q04323 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
UBXN1Q04323 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC19.17■□□□□ 0.66
UBXN1Q04323 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC19.17■□□□□ 0.66
UBXN1Q04323 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
UBXN1Q04323 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC19.17■□□□□ 0.66
UBXN1Q04323 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
UBXN1Q04323 TBC1D3P5-201ENST00000579401 1545 ntBASIC19.17■□□□□ 0.66
UBXN1Q04323 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
UBXN1Q04323 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC19.17■□□□□ 0.66
UBXN1Q04323 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC19.17■□□□□ 0.66
UBXN1Q04323 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
UBXN1Q04323 AGGF1P2-201ENST00000426656 2106 ntBASIC19.17■□□□□ 0.66
UBXN1Q04323 KRT18P38-201ENST00000449496 1282 ntBASIC19.17■□□□□ 0.66
UBXN1Q04323 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC19.17■□□□□ 0.66
UBXN1Q04323 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
UBXN1Q04323 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC19.17■□□□□ 0.66
UBXN1Q04323 FGF14-AS2-201ENST00000606448 1074 ntBASIC19.17■□□□□ 0.66
UBXN1Q04323 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC19.17■□□□□ 0.66
UBXN1Q04323 AC066615.1-201ENST00000640911 628 ntBASIC19.17■□□□□ 0.66
UBXN1Q04323 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
UBXN1Q04323 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
UBXN1Q04323 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
UBXN1Q04323 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
UBXN1Q04323 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
UBXN1Q04323 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC19.17■□□□□ 0.66
UBXN1Q04323 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
UBXN1Q04323 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
UBXN1Q04323 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
UBXN1Q04323 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
UBXN1Q04323 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
UBXN1Q04323 TNRC18P3-201ENST00000441896 2691 ntBASIC19.17■□□□□ 0.66
UBXN1Q04323 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
UBXN1Q04323 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
UBXN1Q04323 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC19.16■□□□□ 0.66
UBXN1Q04323 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
UBXN1Q04323 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC19.16■□□□□ 0.66
UBXN1Q04323 AC010460.3-201ENST00000511359 1579 ntBASIC19.16■□□□□ 0.66
UBXN1Q04323 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
UBXN1Q04323 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
UBXN1Q04323 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
UBXN1Q04323 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC19.16■□□□□ 0.66
UBXN1Q04323 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
UBXN1Q04323 TK1-204ENST00000590430 683 ntTSL 3 BASIC19.16■□□□□ 0.66
UBXN1Q04323 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC19.16■□□□□ 0.66
UBXN1Q04323 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
UBXN1Q04323 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
UBXN1Q04323 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
UBXN1Q04323 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC19.16■□□□□ 0.66
UBXN1Q04323 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
UBXN1Q04323 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
UBXN1Q04323 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
UBXN1Q04323 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
UBXN1Q04323 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC19.16■□□□□ 0.66
UBXN1Q04323 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
UBXN1Q04323 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
UBXN1Q04323 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
UBXN1Q04323 AMT-250ENST00000637682 1823 ntTSL 5 BASIC19.16■□□□□ 0.66
UBXN1Q04323 AC073508.3-201ENST00000619697 1419 ntBASIC19.16■□□□□ 0.66
UBXN1Q04323 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
UBXN1Q04323 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
UBXN1Q04323 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
UBXN1Q04323 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
UBXN1Q04323 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
UBXN1Q04323 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
UBXN1Q04323 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
UBXN1Q04323 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
UBXN1Q04323 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
UBXN1Q04323 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC19.15■□□□□ 0.66
UBXN1Q04323 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
UBXN1Q04323 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
UBXN1Q04323 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
UBXN1Q04323 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
UBXN1Q04323 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
UBXN1Q04323 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC19.15■□□□□ 0.66
UBXN1Q04323 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
UBXN1Q04323 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
UBXN1Q04323 TSPY5P-201ENST00000426936 936 ntBASIC19.15■□□□□ 0.66
UBXN1Q04323 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC19.15■□□□□ 0.66
UBXN1Q04323 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
UBXN1Q04323 AC002558.1-201ENST00000488906 803 ntBASIC19.15■□□□□ 0.66
UBXN1Q04323 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
UBXN1Q04323 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
UBXN1Q04323 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms