Protein–RNA interactions for Protein: Q02742

GCNT1, Beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase, humanhuman

Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCNT1Q02742 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
GCNT1Q02742 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
GCNT1Q02742 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
GCNT1Q02742 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
GCNT1Q02742 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
GCNT1Q02742 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
GCNT1Q02742 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
GCNT1Q02742 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
GCNT1Q02742 AL135999.2-201ENST00000622438 1686 ntBASIC18.66■□□□□ 0.58
GCNT1Q02742 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
GCNT1Q02742 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
GCNT1Q02742 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
GCNT1Q02742 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
GCNT1Q02742 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
GCNT1Q02742 MED16-201ENST00000269814 1199 ntTSL 5 BASIC18.66■□□□□ 0.58
GCNT1Q02742 EMD-201ENST00000369835 966 ntTSL 3 BASIC18.66■□□□□ 0.58
GCNT1Q02742 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC18.66■□□□□ 0.58
GCNT1Q02742 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
GCNT1Q02742 TLE1-202ENST00000376484 666 ntTSL 3 BASIC18.66■□□□□ 0.58
GCNT1Q02742 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
GCNT1Q02742 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
GCNT1Q02742 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
GCNT1Q02742 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC18.66■□□□□ 0.58
GCNT1Q02742 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC18.66■□□□□ 0.58
GCNT1Q02742 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC18.66■□□□□ 0.58
GCNT1Q02742 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
GCNT1Q02742 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
GCNT1Q02742 RHBDF1P1-201ENST00000427504 1941 ntBASIC18.66■□□□□ 0.58
GCNT1Q02742 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
GCNT1Q02742 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
GCNT1Q02742 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
GCNT1Q02742 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC18.66■□□□□ 0.58
GCNT1Q02742 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
GCNT1Q02742 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC18.66■□□□□ 0.58
GCNT1Q02742 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC18.66■□□□□ 0.58
GCNT1Q02742 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
GCNT1Q02742 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
GCNT1Q02742 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC18.65■□□□□ 0.58
GCNT1Q02742 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
GCNT1Q02742 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC18.65■□□□□ 0.58
GCNT1Q02742 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
GCNT1Q02742 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
GCNT1Q02742 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
GCNT1Q02742 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
GCNT1Q02742 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
GCNT1Q02742 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
GCNT1Q02742 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
GCNT1Q02742 LTB4R2-202ENST00000528054 3092 ntBASIC18.65■□□□□ 0.58
GCNT1Q02742 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
GCNT1Q02742 AL020989.1-201ENST00000422979 469 ntBASIC18.65■□□□□ 0.58
GCNT1Q02742 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
GCNT1Q02742 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC18.65■□□□□ 0.58
GCNT1Q02742 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC18.65■□□□□ 0.58
GCNT1Q02742 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
GCNT1Q02742 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
GCNT1Q02742 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC18.65■□□□□ 0.58
GCNT1Q02742 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
GCNT1Q02742 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
GCNT1Q02742 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
GCNT1Q02742 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
GCNT1Q02742 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC18.65■□□□□ 0.58
GCNT1Q02742 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
GCNT1Q02742 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
GCNT1Q02742 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
GCNT1Q02742 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
GCNT1Q02742 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC18.65■□□□□ 0.58
GCNT1Q02742 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
GCNT1Q02742 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
GCNT1Q02742 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
GCNT1Q02742 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
GCNT1Q02742 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
GCNT1Q02742 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC18.64■□□□□ 0.58
GCNT1Q02742 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
GCNT1Q02742 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC18.64■□□□□ 0.58
GCNT1Q02742 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC18.64■□□□□ 0.58
GCNT1Q02742 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC18.64■□□□□ 0.58
GCNT1Q02742 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
GCNT1Q02742 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
GCNT1Q02742 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
GCNT1Q02742 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC18.64■□□□□ 0.57
GCNT1Q02742 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
GCNT1Q02742 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
GCNT1Q02742 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
GCNT1Q02742 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC18.64■□□□□ 0.57
GCNT1Q02742 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC18.64■□□□□ 0.57
GCNT1Q02742 AC132008.2-207ENST00000454517 770 ntBASIC18.64■□□□□ 0.57
GCNT1Q02742 AC106795.1-205ENST00000512851 1056 ntBASIC18.64■□□□□ 0.57
GCNT1Q02742 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC18.64■□□□□ 0.57
GCNT1Q02742 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.57
GCNT1Q02742 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC18.64■□□□□ 0.57
GCNT1Q02742 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC18.64■□□□□ 0.57
GCNT1Q02742 AL121772.3-201ENST00000610840 674 ntBASIC18.64■□□□□ 0.57
GCNT1Q02742 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
GCNT1Q02742 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
GCNT1Q02742 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
GCNT1Q02742 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
GCNT1Q02742 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
GCNT1Q02742 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC18.64■□□□□ 0.57
GCNT1Q02742 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC18.64■□□□□ 0.57
GCNT1Q02742 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 63.5 ms