Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC13.8□□□□□ -0.2
CCL20P78556 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC13.8□□□□□ -0.2
CCL20P78556 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC13.8□□□□□ -0.2
CCL20P78556 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC13.8□□□□□ -0.2
CCL20P78556 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC13.8□□□□□ -0.2
CCL20P78556 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CCL20P78556 AC116407.2-201ENST00000613639 860 ntBASIC13.8□□□□□ -0.2
CCL20P78556 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CCL20P78556 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC13.8□□□□□ -0.2
CCL20P78556 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC13.8□□□□□ -0.2
CCL20P78556 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CCL20P78556 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
CCL20P78556 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
CCL20P78556 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
CCL20P78556 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CCL20P78556 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CCL20P78556 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CCL20P78556 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
CCL20P78556 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CCL20P78556 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC13.8□□□□□ -0.2
CCL20P78556 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CCL20P78556 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CCL20P78556 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC13.8□□□□□ -0.2
CCL20P78556 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
CCL20P78556 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC13.8□□□□□ -0.2
CCL20P78556 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CCL20P78556 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CCL20P78556 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC13.79□□□□□ -0.2
CCL20P78556 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CCL20P78556 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC13.79□□□□□ -0.2
CCL20P78556 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
CCL20P78556 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC13.79□□□□□ -0.2
CCL20P78556 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
CCL20P78556 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC13.79□□□□□ -0.2
CCL20P78556 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC13.79□□□□□ -0.2
CCL20P78556 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CCL20P78556 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
CCL20P78556 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CCL20P78556 RHEB-204ENST00000472642 900 ntTSL 3 BASIC13.79□□□□□ -0.2
CCL20P78556 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC13.79□□□□□ -0.2
CCL20P78556 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC13.79□□□□□ -0.2
CCL20P78556 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CCL20P78556 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC13.79□□□□□ -0.2
CCL20P78556 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CCL20P78556 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC13.79□□□□□ -0.2
CCL20P78556 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CCL20P78556 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
CCL20P78556 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CCL20P78556 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC13.79□□□□□ -0.2
CCL20P78556 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CCL20P78556 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC13.79□□□□□ -0.2
CCL20P78556 KRT8P9-201ENST00000558927 1449 ntBASIC13.79□□□□□ -0.2
CCL20P78556 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CCL20P78556 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CCL20P78556 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CCL20P78556 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CCL20P78556 AC126177.1-201ENST00000547829 2218 ntBASIC13.79□□□□□ -0.2
CCL20P78556 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CCL20P78556 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CCL20P78556 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC13.79□□□□□ -0.2
CCL20P78556 FES-204ENST00000414248 2327 ntTSL 2 BASIC13.79□□□□□ -0.2
CCL20P78556 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CCL20P78556 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
CCL20P78556 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CCL20P78556 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CCL20P78556 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CCL20P78556 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CCL20P78556 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CCL20P78556 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC13.78□□□□□ -0.2
CCL20P78556 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CCL20P78556 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CCL20P78556 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC13.78□□□□□ -0.2
CCL20P78556 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CCL20P78556 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CCL20P78556 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
CCL20P78556 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
CCL20P78556 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC13.78□□□□□ -0.2
CCL20P78556 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CCL20P78556 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC13.78□□□□□ -0.2
CCL20P78556 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CCL20P78556 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
CCL20P78556 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC13.78□□□□□ -0.2
CCL20P78556 BUB3-202ENST00000368859 667 ntTSL 3 BASIC13.78□□□□□ -0.2
CCL20P78556 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC13.78□□□□□ -0.2
CCL20P78556 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CCL20P78556 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
CCL20P78556 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CCL20P78556 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CCL20P78556 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CCL20P78556 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CCL20P78556 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC13.78□□□□□ -0.2
CCL20P78556 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CCL20P78556 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CCL20P78556 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CCL20P78556 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CCL20P78556 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CCL20P78556 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
CCL20P78556 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC13.78□□□□□ -0.2
CCL20P78556 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC13.78□□□□□ -0.2
CCL20P78556 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms