Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC15.19■□□□□ 0.02
HCFC1P51610 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
HCFC1P51610 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
HCFC1P51610 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
HCFC1P51610 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HCFC1P51610 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
HCFC1P51610 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HCFC1P51610 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC15.18■□□□□ 0.02
HCFC1P51610 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HCFC1P51610 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
HCFC1P51610 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HCFC1P51610 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HCFC1P51610 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC15.18■□□□□ 0.02
HCFC1P51610 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
HCFC1P51610 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HCFC1P51610 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HCFC1P51610 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
HCFC1P51610 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
HCFC1P51610 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC15.18■□□□□ 0.02
HCFC1P51610 AC087163.2-201ENST00000457299 853 ntBASIC15.18■□□□□ 0.02
HCFC1P51610 DUTP2-201ENST00000519164 463 ntBASIC15.18■□□□□ 0.02
HCFC1P51610 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC15.18■□□□□ 0.02
HCFC1P51610 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HCFC1P51610 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
HCFC1P51610 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC15.18■□□□□ 0.02
HCFC1P51610 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HCFC1P51610 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
HCFC1P51610 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
HCFC1P51610 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
HCFC1P51610 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
HCFC1P51610 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
HCFC1P51610 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HCFC1P51610 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC15.17■□□□□ 0.02
HCFC1P51610 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
HCFC1P51610 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC15.17■□□□□ 0.02
HCFC1P51610 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
HCFC1P51610 WDR53-203ENST00000429115 683 ntTSL 2 BASIC15.17■□□□□ 0.02
HCFC1P51610 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
HCFC1P51610 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HCFC1P51610 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC15.17■□□□□ 0.02
HCFC1P51610 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC15.17■□□□□ 0.02
HCFC1P51610 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC15.17■□□□□ 0.02
HCFC1P51610 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
HCFC1P51610 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC15.17■□□□□ 0.02
HCFC1P51610 LSM12-202ENST00000585388 942 ntTSL 3 BASIC15.17■□□□□ 0.02
HCFC1P51610 AC092364.2-202ENST00000597012 1073 ntBASIC15.17■□□□□ 0.02
HCFC1P51610 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC15.17■□□□□ 0.02
HCFC1P51610 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HCFC1P51610 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
HCFC1P51610 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HCFC1P51610 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC15.17■□□□□ 0.02
HCFC1P51610 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HCFC1P51610 BCAR1-209ENST00000546196 1340 ntBASIC15.17■□□□□ 0.02
HCFC1P51610 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HCFC1P51610 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HCFC1P51610 AC068880.1-201ENST00000507289 2297 ntBASIC15.17■□□□□ 0.02
HCFC1P51610 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
HCFC1P51610 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
HCFC1P51610 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC15.17■□□□□ 0.02
HCFC1P51610 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HCFC1P51610 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
HCFC1P51610 ACTG1P14-201ENST00000446382 1122 ntBASIC15.17■□□□□ 0.02
HCFC1P51610 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC15.17■□□□□ 0.02
HCFC1P51610 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC15.17■□□□□ 0.02
HCFC1P51610 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC15.17■□□□□ 0.02
HCFC1P51610 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
HCFC1P51610 IGHV3OR16-6-201ENST00000568775 360 ntBASIC15.17■□□□□ 0.02
HCFC1P51610 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC15.17■□□□□ 0.02
HCFC1P51610 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC15.17■□□□□ 0.02
HCFC1P51610 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
HCFC1P51610 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC15.17■□□□□ 0.02
HCFC1P51610 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
HCFC1P51610 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HCFC1P51610 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HCFC1P51610 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC15.17■□□□□ 0.02
HCFC1P51610 POR-209ENST00000439269 1858 ntTSL 2 BASIC15.17■□□□□ 0.02
HCFC1P51610 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
HCFC1P51610 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC15.16■□□□□ 0.02
HCFC1P51610 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
HCFC1P51610 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC15.16■□□□□ 0.02
HCFC1P51610 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
HCFC1P51610 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
HCFC1P51610 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HCFC1P51610 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HCFC1P51610 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
HCFC1P51610 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
HCFC1P51610 DDT-204ENST00000404092 805 ntTSL 3 BASIC15.16■□□□□ 0.02
HCFC1P51610 HLA-J-203ENST00000494367 1087 ntBASIC15.16■□□□□ 0.02
HCFC1P51610 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC15.16■□□□□ 0.02
HCFC1P51610 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
HCFC1P51610 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC15.16■□□□□ 0.02
HCFC1P51610 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
HCFC1P51610 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC15.16■□□□□ 0.02
HCFC1P51610 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC15.16■□□□□ 0.02
HCFC1P51610 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC15.16■□□□□ 0.02
HCFC1P51610 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HCFC1P51610 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC15.16■□□□□ 0.02
HCFC1P51610 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HCFC1P51610 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HCFC1P51610 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC15.16■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms