Protein–RNA interactions for Protein: P51157

RAB28, Ras-related protein Rab-28, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28P51157 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RAB28P51157 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
RAB28P51157 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RAB28P51157 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RAB28P51157 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RAB28P51157 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RAB28P51157 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RAB28P51157 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RAB28P51157 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC16.89■□□□□ 0.29
RAB28P51157 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC16.89■□□□□ 0.29
RAB28P51157 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
RAB28P51157 FAM197Y8-203ENST00000450145 560 ntBASIC16.89■□□□□ 0.29
RAB28P51157 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC16.89■□□□□ 0.29
RAB28P51157 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC16.89■□□□□ 0.29
RAB28P51157 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC16.89■□□□□ 0.29
RAB28P51157 COPE-211ENST00000600932 1144 ntTSL 5 BASIC16.89■□□□□ 0.29
RAB28P51157 AC064862.7-201ENST00000604520 867 ntBASIC16.89■□□□□ 0.29
RAB28P51157 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC16.89■□□□□ 0.29
RAB28P51157 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
RAB28P51157 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
RAB28P51157 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RAB28P51157 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC16.89■□□□□ 0.29
RAB28P51157 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RAB28P51157 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RAB28P51157 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RAB28P51157 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RAB28P51157 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC16.89■□□□□ 0.29
RAB28P51157 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RAB28P51157 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
RAB28P51157 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
RAB28P51157 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC16.88■□□□□ 0.29
RAB28P51157 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC16.88■□□□□ 0.29
RAB28P51157 LINC00896-202ENST00000609602 2128 ntBASIC16.88■□□□□ 0.29
RAB28P51157 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RAB28P51157 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC16.88■□□□□ 0.29
RAB28P51157 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
RAB28P51157 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RAB28P51157 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RAB28P51157 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RAB28P51157 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RAB28P51157 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RAB28P51157 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC16.88■□□□□ 0.29
RAB28P51157 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RAB28P51157 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RAB28P51157 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC16.88■□□□□ 0.29
RAB28P51157 KRT18P67-201ENST00000432816 1264 ntBASIC16.88■□□□□ 0.29
RAB28P51157 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC16.88■□□□□ 0.29
RAB28P51157 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC16.88■□□□□ 0.29
RAB28P51157 AF186996.4-201ENST00000467186 377 ntBASIC16.88■□□□□ 0.29
RAB28P51157 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC16.88■□□□□ 0.29
RAB28P51157 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
RAB28P51157 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC16.88■□□□□ 0.29
RAB28P51157 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC16.88■□□□□ 0.29
RAB28P51157 S100A2-206ENST00000497140 697 ntTSL 2 BASIC16.88■□□□□ 0.29
RAB28P51157 MSRA-206ENST00000521209 814 ntTSL 3 BASIC16.88■□□□□ 0.29
RAB28P51157 AC021087.4-201ENST00000563761 564 ntBASIC16.88■□□□□ 0.29
RAB28P51157 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC16.88■□□□□ 0.29
RAB28P51157 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC16.88■□□□□ 0.29
RAB28P51157 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
RAB28P51157 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RAB28P51157 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RAB28P51157 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC16.88■□□□□ 0.29
RAB28P51157 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
RAB28P51157 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC16.88■□□□□ 0.29
RAB28P51157 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC16.88■□□□□ 0.29
RAB28P51157 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
RAB28P51157 AC004817.3-201ENST00000602957 2129 ntBASIC16.88■□□□□ 0.29
RAB28P51157 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RAB28P51157 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
RAB28P51157 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RAB28P51157 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RAB28P51157 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC16.88■□□□□ 0.29
RAB28P51157 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RAB28P51157 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC16.88■□□□□ 0.29
RAB28P51157 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RAB28P51157 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
RAB28P51157 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RAB28P51157 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
RAB28P51157 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
RAB28P51157 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC16.87■□□□□ 0.29
RAB28P51157 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC16.87■□□□□ 0.29
RAB28P51157 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC16.87■□□□□ 0.29
RAB28P51157 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC16.87■□□□□ 0.29
RAB28P51157 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
RAB28P51157 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC16.87■□□□□ 0.29
RAB28P51157 RNPS1P1-201ENST00000507437 918 ntBASIC16.87■□□□□ 0.29
RAB28P51157 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC16.87■□□□□ 0.29
RAB28P51157 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC16.87■□□□□ 0.29
RAB28P51157 MTDHP4-201ENST00000600287 670 ntBASIC16.87■□□□□ 0.29
RAB28P51157 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC16.87■□□□□ 0.29
RAB28P51157 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC16.87■□□□□ 0.29
RAB28P51157 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
RAB28P51157 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
RAB28P51157 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RAB28P51157 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
RAB28P51157 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC16.87■□□□□ 0.29
RAB28P51157 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RAB28P51157 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RAB28P51157 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RAB28P51157 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms