Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC16.87■□□□□ 0.29
SLC6A12P48065 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC16.87■□□□□ 0.29
SLC6A12P48065 NKTR-203ENST00000442970 646 ntTSL 2 BASIC16.87■□□□□ 0.29
SLC6A12P48065 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SLC6A12P48065 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SLC6A12P48065 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SLC6A12P48065 FICD-205ENST00000552758 603 ntTSL 2 BASIC16.87■□□□□ 0.29
SLC6A12P48065 PNN-202ENST00000553331 656 ntTSL 3 BASIC16.87■□□□□ 0.29
SLC6A12P48065 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC16.87■□□□□ 0.29
SLC6A12P48065 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC16.87■□□□□ 0.29
SLC6A12P48065 MIR5100-201ENST00000579544 119 ntBASIC16.87■□□□□ 0.29
SLC6A12P48065 GZMM-202ENST00000592501 941 ntTSL 3 BASIC16.87■□□□□ 0.29
SLC6A12P48065 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SLC6A12P48065 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC16.87■□□□□ 0.29
SLC6A12P48065 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SLC6A12P48065 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SLC6A12P48065 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SLC6A12P48065 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
SLC6A12P48065 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SLC6A12P48065 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC16.87■□□□□ 0.29
SLC6A12P48065 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SLC6A12P48065 LINC02012-201ENST00000608206 1725 ntBASIC16.87■□□□□ 0.29
SLC6A12P48065 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC16.87■□□□□ 0.29
SLC6A12P48065 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
SLC6A12P48065 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
SLC6A12P48065 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
SLC6A12P48065 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC16.87■□□□□ 0.29
SLC6A12P48065 PRORSD1P-202ENST00000563365 2154 ntBASIC16.87■□□□□ 0.29
SLC6A12P48065 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
SLC6A12P48065 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
SLC6A12P48065 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SLC6A12P48065 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SLC6A12P48065 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
SLC6A12P48065 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SLC6A12P48065 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
SLC6A12P48065 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SLC6A12P48065 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SLC6A12P48065 AL135999.2-201ENST00000622438 1686 ntBASIC16.86■□□□□ 0.29
SLC6A12P48065 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SLC6A12P48065 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SLC6A12P48065 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
SLC6A12P48065 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC16.86■□□□□ 0.29
SLC6A12P48065 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC16.86■□□□□ 0.29
SLC6A12P48065 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
SLC6A12P48065 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
SLC6A12P48065 THAP5-204ENST00000438865 868 ntTSL 2 BASIC16.86■□□□□ 0.29
SLC6A12P48065 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC16.86■□□□□ 0.29
SLC6A12P48065 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC16.86■□□□□ 0.29
SLC6A12P48065 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SLC6A12P48065 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SLC6A12P48065 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
SLC6A12P48065 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SLC6A12P48065 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SLC6A12P48065 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
SLC6A12P48065 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
SLC6A12P48065 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SLC6A12P48065 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
SLC6A12P48065 AC106820.2-201ENST00000563775 3264 ntBASIC16.86■□□□□ 0.29
SLC6A12P48065 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
SLC6A12P48065 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SLC6A12P48065 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SLC6A12P48065 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
SLC6A12P48065 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC16.85■□□□□ 0.29
SLC6A12P48065 AL121761.2-201ENST00000598007 1648 ntBASIC16.85■□□□□ 0.29
SLC6A12P48065 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SLC6A12P48065 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC16.85■□□□□ 0.29
SLC6A12P48065 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC16.85■□□□□ 0.29
SLC6A12P48065 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SLC6A12P48065 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SLC6A12P48065 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
SLC6A12P48065 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SLC6A12P48065 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SLC6A12P48065 AC022211.2-201ENST00000585075 2527 ntBASIC16.85■□□□□ 0.29
SLC6A12P48065 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SLC6A12P48065 NUS1P2-201ENST00000417358 873 ntBASIC16.85■□□□□ 0.29
SLC6A12P48065 SRP19-202ENST00000445150 833 ntTSL 2 BASIC16.85■□□□□ 0.29
SLC6A12P48065 COX5A-204ENST00000567270 579 ntTSL 3 BASIC16.85■□□□□ 0.29
SLC6A12P48065 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
SLC6A12P48065 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC16.85■□□□□ 0.29
SLC6A12P48065 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SLC6A12P48065 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
SLC6A12P48065 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SLC6A12P48065 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC16.85■□□□□ 0.29
SLC6A12P48065 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC16.85■□□□□ 0.29
SLC6A12P48065 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SLC6A12P48065 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SLC6A12P48065 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SLC6A12P48065 WAC-202ENST00000347934 2839 ntTSL 5 BASIC16.85■□□□□ 0.29
SLC6A12P48065 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
SLC6A12P48065 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC16.85■□□□□ 0.29
SLC6A12P48065 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
SLC6A12P48065 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SLC6A12P48065 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SLC6A12P48065 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
SLC6A12P48065 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SLC6A12P48065 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SLC6A12P48065 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SLC6A12P48065 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC16.85■□□□□ 0.29
SLC6A12P48065 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SLC6A12P48065 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 61.8 ms