Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SLC1A1P43005 KRT8P26-201ENST00000534154 1276 ntBASIC18.32■□□□□ 0.52
SLC1A1P43005 CD320-202ENST00000537716 1119 ntTSL 2 BASIC18.32■□□□□ 0.52
SLC1A1P43005 AC111152.3-201ENST00000569699 673 ntBASIC18.32■□□□□ 0.52
SLC1A1P43005 RN7SL850P-201ENST00000579959 291 ntBASIC18.32■□□□□ 0.52
SLC1A1P43005 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC18.32■□□□□ 0.52
SLC1A1P43005 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SLC1A1P43005 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
SLC1A1P43005 AL049757.1-201ENST00000616842 1596 ntBASIC18.32■□□□□ 0.52
SLC1A1P43005 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SLC1A1P43005 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SLC1A1P43005 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SLC1A1P43005 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
SLC1A1P43005 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SLC1A1P43005 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SLC1A1P43005 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SLC1A1P43005 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
SLC1A1P43005 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SLC1A1P43005 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SLC1A1P43005 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SLC1A1P43005 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
SLC1A1P43005 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
SLC1A1P43005 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
SLC1A1P43005 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC18.31■□□□□ 0.52
SLC1A1P43005 AC046185.3-201ENST00000623228 1824 ntBASIC18.31■□□□□ 0.52
SLC1A1P43005 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SLC1A1P43005 ENSA-206ENST00000361631 725 ntTSL 2 BASIC18.31■□□□□ 0.52
SLC1A1P43005 SLC25A1P3-201ENST00000395415 828 ntBASIC18.31■□□□□ 0.52
SLC1A1P43005 RCN1P1-201ENST00000400413 996 ntBASIC18.31■□□□□ 0.52
SLC1A1P43005 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
SLC1A1P43005 AL845331.1-201ENST00000424978 1190 ntBASIC18.31■□□□□ 0.52
SLC1A1P43005 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC18.31■□□□□ 0.52
SLC1A1P43005 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SLC1A1P43005 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
SLC1A1P43005 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC18.31■□□□□ 0.52
SLC1A1P43005 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC18.31■□□□□ 0.52
SLC1A1P43005 AC005336.2-201ENST00000593183 939 ntBASIC18.31■□□□□ 0.52
SLC1A1P43005 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
SLC1A1P43005 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
SLC1A1P43005 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SLC1A1P43005 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC18.31■□□□□ 0.52
SLC1A1P43005 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
SLC1A1P43005 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC18.31■□□□□ 0.52
SLC1A1P43005 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC18.31■□□□□ 0.52
SLC1A1P43005 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC18.31■□□□□ 0.52
SLC1A1P43005 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SLC1A1P43005 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
SLC1A1P43005 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SLC1A1P43005 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SLC1A1P43005 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
SLC1A1P43005 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
SLC1A1P43005 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
SLC1A1P43005 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SLC1A1P43005 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SLC1A1P43005 AC060834.1-201ENST00000443027 2032 ntBASIC18.3■□□□□ 0.52
SLC1A1P43005 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SLC1A1P43005 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SLC1A1P43005 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC18.3■□□□□ 0.52
SLC1A1P43005 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC18.3■□□□□ 0.52
SLC1A1P43005 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SLC1A1P43005 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SLC1A1P43005 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SLC1A1P43005 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
SLC1A1P43005 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC18.3■□□□□ 0.52
SLC1A1P43005 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC18.3■□□□□ 0.52
SLC1A1P43005 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC18.3■□□□□ 0.52
SLC1A1P43005 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC18.3■□□□□ 0.52
SLC1A1P43005 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC18.3■□□□□ 0.52
SLC1A1P43005 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC18.3■□□□□ 0.52
SLC1A1P43005 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
SLC1A1P43005 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SLC1A1P43005 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SLC1A1P43005 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
SLC1A1P43005 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SLC1A1P43005 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SLC1A1P43005 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SLC1A1P43005 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SLC1A1P43005 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SLC1A1P43005 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
SLC1A1P43005 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SLC1A1P43005 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC18.3■□□□□ 0.52
SLC1A1P43005 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC18.29■□□□□ 0.52
SLC1A1P43005 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SLC1A1P43005 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC18.29■□□□□ 0.52
SLC1A1P43005 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC18.29■□□□□ 0.52
SLC1A1P43005 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
SLC1A1P43005 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC18.29■□□□□ 0.52
SLC1A1P43005 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
SLC1A1P43005 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SLC1A1P43005 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
SLC1A1P43005 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SLC1A1P43005 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SLC1A1P43005 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SLC1A1P43005 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC18.29■□□□□ 0.52
SLC1A1P43005 DANCR-204ENST00000444958 709 ntTSL 3 BASIC18.29■□□□□ 0.52
SLC1A1P43005 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SLC1A1P43005 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC18.29■□□□□ 0.52
SLC1A1P43005 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC18.29■□□□□ 0.52
SLC1A1P43005 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC18.29■□□□□ 0.52
SLC1A1P43005 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms