Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
GDNFP39905 WT1-209ENST00000530998 2421 ntTSL 2 BASIC15.27■□□□□ 0.03
GDNFP39905 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
GDNFP39905 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC15.27■□□□□ 0.03
GDNFP39905 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.03
GDNFP39905 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
GDNFP39905 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC15.27■□□□□ 0.03
GDNFP39905 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
GDNFP39905 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
GDNFP39905 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
GDNFP39905 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
GDNFP39905 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC15.26■□□□□ 0.03
GDNFP39905 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
GDNFP39905 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
GDNFP39905 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC15.26■□□□□ 0.03
GDNFP39905 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
GDNFP39905 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC15.26■□□□□ 0.03
GDNFP39905 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
GDNFP39905 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
GDNFP39905 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
GDNFP39905 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
GDNFP39905 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
GDNFP39905 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC15.26■□□□□ 0.03
GDNFP39905 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
GDNFP39905 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
GDNFP39905 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
GDNFP39905 GXYLT1P6-201ENST00000456472 1187 ntBASIC15.26■□□□□ 0.03
GDNFP39905 AC128688.1-201ENST00000487626 519 ntBASIC15.26■□□□□ 0.03
GDNFP39905 TMA16-209ENST00000513272 803 ntTSL 2 BASIC15.26■□□□□ 0.03
GDNFP39905 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
GDNFP39905 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC15.26■□□□□ 0.03
GDNFP39905 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC15.26■□□□□ 0.03
GDNFP39905 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
GDNFP39905 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
GDNFP39905 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
GDNFP39905 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
GDNFP39905 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
GDNFP39905 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
GDNFP39905 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
GDNFP39905 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
GDNFP39905 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
GDNFP39905 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
GDNFP39905 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
GDNFP39905 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
GDNFP39905 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
GDNFP39905 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
GDNFP39905 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC15.26■□□□□ 0.03
GDNFP39905 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
GDNFP39905 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
GDNFP39905 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
GDNFP39905 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
GDNFP39905 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC15.25■□□□□ 0.03
GDNFP39905 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
GDNFP39905 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
GDNFP39905 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC15.25■□□□□ 0.03
GDNFP39905 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC15.25■□□□□ 0.03
GDNFP39905 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC15.25■□□□□ 0.03
GDNFP39905 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
GDNFP39905 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
GDNFP39905 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
GDNFP39905 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
GDNFP39905 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC15.25■□□□□ 0.03
GDNFP39905 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
GDNFP39905 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC15.25■□□□□ 0.03
GDNFP39905 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
GDNFP39905 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
GDNFP39905 PGR-209ENST00000617858 2816 ntTSL 5 BASIC15.25■□□□□ 0.03
GDNFP39905 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
GDNFP39905 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC15.25■□□□□ 0.03
GDNFP39905 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC15.25■□□□□ 0.03
GDNFP39905 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC15.25■□□□□ 0.03
GDNFP39905 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
GDNFP39905 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
GDNFP39905 RPS20-210ENST00000523936 899 ntTSL 2 BASIC15.25■□□□□ 0.03
GDNFP39905 DUT-205ENST00000558813 769 ntTSL 2 BASIC15.25■□□□□ 0.03
GDNFP39905 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC15.25■□□□□ 0.03
GDNFP39905 WWOX-216ENST00000569818 525 ntBASIC15.25■□□□□ 0.03
GDNFP39905 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC15.25■□□□□ 0.03
GDNFP39905 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC15.25■□□□□ 0.03
GDNFP39905 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC15.25■□□□□ 0.03
GDNFP39905 LINC01451-201ENST00000623792 534 ntBASIC15.25■□□□□ 0.03
GDNFP39905 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
GDNFP39905 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
GDNFP39905 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
GDNFP39905 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
GDNFP39905 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
GDNFP39905 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
GDNFP39905 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
GDNFP39905 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
GDNFP39905 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC15.25■□□□□ 0.03
GDNFP39905 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
GDNFP39905 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
GDNFP39905 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
GDNFP39905 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
GDNFP39905 PCDHB17P-201ENST00000539533 2393 ntBASIC15.25■□□□□ 0.03
GDNFP39905 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
GDNFP39905 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
GDNFP39905 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC15.25■□□□□ 0.03
GDNFP39905 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
GDNFP39905 GCK-209ENST00000616242 2260 ntTSL 5 BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms