Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CKS2P33552 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC12.92□□□□□ -0.34
CKS2P33552 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
CKS2P33552 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CKS2P33552 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CKS2P33552 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CKS2P33552 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CKS2P33552 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
CKS2P33552 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
CKS2P33552 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CKS2P33552 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CKS2P33552 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
CKS2P33552 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
CKS2P33552 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC12.91□□□□□ -0.34
CKS2P33552 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC12.91□□□□□ -0.34
CKS2P33552 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CKS2P33552 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CKS2P33552 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC12.91□□□□□ -0.34
CKS2P33552 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
CKS2P33552 GCK-209ENST00000616242 2260 ntTSL 5 BASIC12.91□□□□□ -0.34
CKS2P33552 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC12.91□□□□□ -0.34
CKS2P33552 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CKS2P33552 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
CKS2P33552 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CKS2P33552 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC12.91□□□□□ -0.34
CKS2P33552 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CKS2P33552 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CKS2P33552 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC12.91□□□□□ -0.34
CKS2P33552 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CKS2P33552 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
CKS2P33552 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
CKS2P33552 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CKS2P33552 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CKS2P33552 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CKS2P33552 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CKS2P33552 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC12.91□□□□□ -0.34
CKS2P33552 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC12.91□□□□□ -0.34
CKS2P33552 AC006970.2-201ENST00000450065 779 ntBASIC12.91□□□□□ -0.34
CKS2P33552 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC12.91□□□□□ -0.34
CKS2P33552 AP002982.1-201ENST00000492365 877 ntBASIC12.91□□□□□ -0.34
CKS2P33552 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
CKS2P33552 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC12.91□□□□□ -0.34
CKS2P33552 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC12.91□□□□□ -0.34
CKS2P33552 AC083880.1-201ENST00000608266 535 ntBASIC12.91□□□□□ -0.34
CKS2P33552 INO80E-214ENST00000620599 515 ntTSL 2 BASIC12.91□□□□□ -0.34
CKS2P33552 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CKS2P33552 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CKS2P33552 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC12.91□□□□□ -0.34
CKS2P33552 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CKS2P33552 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
CKS2P33552 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC12.91□□□□□ -0.34
CKS2P33552 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
CKS2P33552 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
CKS2P33552 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC12.91□□□□□ -0.34
CKS2P33552 PGR-209ENST00000617858 2816 ntTSL 5 BASIC12.91□□□□□ -0.34
CKS2P33552 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CKS2P33552 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
CKS2P33552 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CKS2P33552 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
CKS2P33552 AL024508.2-201ENST00000607749 1894 ntBASIC12.91□□□□□ -0.34
CKS2P33552 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
CKS2P33552 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CKS2P33552 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CKS2P33552 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CKS2P33552 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC12.91□□□□□ -0.34
CKS2P33552 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
CKS2P33552 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
CKS2P33552 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC12.91□□□□□ -0.34
CKS2P33552 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CKS2P33552 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
CKS2P33552 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CKS2P33552 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CKS2P33552 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CKS2P33552 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CKS2P33552 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CKS2P33552 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC12.9□□□□□ -0.34
CKS2P33552 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
CKS2P33552 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
CKS2P33552 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CKS2P33552 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CKS2P33552 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
CKS2P33552 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CKS2P33552 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CKS2P33552 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC12.9□□□□□ -0.34
CKS2P33552 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CKS2P33552 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC12.9□□□□□ -0.34
CKS2P33552 PCDHB17P-201ENST00000539533 2393 ntBASIC12.9□□□□□ -0.34
CKS2P33552 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CKS2P33552 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CKS2P33552 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CKS2P33552 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CKS2P33552 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC12.9□□□□□ -0.34
CKS2P33552 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CKS2P33552 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CKS2P33552 CROCCP5-201ENST00000436658 830 ntBASIC12.9□□□□□ -0.34
CKS2P33552 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC12.9□□□□□ -0.34
CKS2P33552 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC12.9□□□□□ -0.34
CKS2P33552 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC12.9□□□□□ -0.34
CKS2P33552 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC12.9□□□□□ -0.34
CKS2P33552 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC12.9□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 70 ms