Protein–RNA interactions for Protein: P19256

CD58, Lymphocyte function-associated antigen 3, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD58P19256 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CD58P19256 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
CD58P19256 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CD58P19256 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC18.8■□□□□ 0.6
CD58P19256 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
CD58P19256 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
CD58P19256 PP12613-201ENST00000424958 2230 ntBASIC18.8■□□□□ 0.6
CD58P19256 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
CD58P19256 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
CD58P19256 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC18.79■□□□□ 0.6
CD58P19256 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CD58P19256 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC18.79■□□□□ 0.6
CD58P19256 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CD58P19256 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
CD58P19256 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
CD58P19256 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC18.79■□□□□ 0.6
CD58P19256 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC18.79■□□□□ 0.6
CD58P19256 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC18.79■□□□□ 0.6
CD58P19256 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CD58P19256 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CD58P19256 MED16-201ENST00000269814 1199 ntTSL 5 BASIC18.79■□□□□ 0.6
CD58P19256 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CD58P19256 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC18.79■□□□□ 0.6
CD58P19256 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC18.79■□□□□ 0.6
CD58P19256 AC002558.1-201ENST00000488906 803 ntBASIC18.79■□□□□ 0.6
CD58P19256 IGHV3-52-201ENST00000519770 353 ntBASIC18.79■□□□□ 0.6
CD58P19256 TOLLIP-AS1-201ENST00000530897 939 ntBASIC18.79■□□□□ 0.6
CD58P19256 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
CD58P19256 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CD58P19256 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CD58P19256 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CD58P19256 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
CD58P19256 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CD58P19256 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC18.79■□□□□ 0.6
CD58P19256 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CD58P19256 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CD58P19256 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CD58P19256 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
CD58P19256 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
CD58P19256 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC18.78■□□□□ 0.6
CD58P19256 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC18.78■□□□□ 0.6
CD58P19256 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC18.78■□□□□ 0.6
CD58P19256 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CD58P19256 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CD58P19256 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CD58P19256 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CD58P19256 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CD58P19256 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CD58P19256 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CD58P19256 DFFB-203ENST00000341385 572 ntTSL 5 BASIC18.78■□□□□ 0.6
CD58P19256 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CD58P19256 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC18.78■□□□□ 0.6
CD58P19256 CTNS-203ENST00000399306 803 ntTSL 3 BASIC18.78■□□□□ 0.6
CD58P19256 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CD58P19256 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CD58P19256 LSM5-204ENST00000409909 740 ntTSL 2 BASIC18.78■□□□□ 0.6
CD58P19256 NKTR-203ENST00000442970 646 ntTSL 2 BASIC18.78■□□□□ 0.6
CD58P19256 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC18.78■□□□□ 0.6
CD58P19256 TPM1-218ENST00000559281 851 ntTSL 5 BASIC18.78■□□□□ 0.6
CD58P19256 AC111152.3-201ENST00000569699 673 ntBASIC18.78■□□□□ 0.6
CD58P19256 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC18.78■□□□□ 0.6
CD58P19256 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
CD58P19256 TBCB-205ENST00000585746 875 ntTSL 3 BASIC18.78■□□□□ 0.6
CD58P19256 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC18.78■□□□□ 0.6
CD58P19256 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
CD58P19256 IFNL4P1-201ENST00000607083 540 ntBASIC18.78■□□□□ 0.6
CD58P19256 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CD58P19256 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CD58P19256 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC18.78■□□□□ 0.6
CD58P19256 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CD58P19256 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
CD58P19256 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC18.78■□□□□ 0.6
CD58P19256 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
CD58P19256 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CD58P19256 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
CD58P19256 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC18.78■□□□□ 0.6
CD58P19256 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC18.77■□□□□ 0.6
CD58P19256 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC18.77■□□□□ 0.6
CD58P19256 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CD58P19256 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CD58P19256 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CD58P19256 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CD58P19256 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
CD58P19256 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CD58P19256 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC18.77■□□□□ 0.6
CD58P19256 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC18.77■□□□□ 0.6
CD58P19256 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC18.77■□□□□ 0.6
CD58P19256 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CD58P19256 WAC-202ENST00000347934 2839 ntTSL 5 BASIC18.77■□□□□ 0.6
CD58P19256 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CD58P19256 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC18.77■□□□□ 0.6
CD58P19256 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC18.77■□□□□ 0.6
CD58P19256 UNC93B7-201ENST00000509439 705 ntBASIC18.77■□□□□ 0.6
CD58P19256 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CD58P19256 AP001269.4-201ENST00000609611 512 ntBASIC18.77■□□□□ 0.6
CD58P19256 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
CD58P19256 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CD58P19256 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CD58P19256 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CD58P19256 LYSMD4-203ENST00000378904 2122 ntBASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms