Protein–RNA interactions for Protein: P17600

SYN1, Synapsin-1, humanhuman

Predictions only

Length 705 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYN1P17600 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SYN1P17600 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SYN1P17600 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
SYN1P17600 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC18.89■□□□□ 0.61
SYN1P17600 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC18.89■□□□□ 0.61
SYN1P17600 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC18.89■□□□□ 0.61
SYN1P17600 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC18.89■□□□□ 0.61
SYN1P17600 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC18.89■□□□□ 0.61
SYN1P17600 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
SYN1P17600 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC18.89■□□□□ 0.61
SYN1P17600 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
SYN1P17600 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC18.89■□□□□ 0.61
SYN1P17600 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
SYN1P17600 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
SYN1P17600 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SYN1P17600 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SYN1P17600 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SYN1P17600 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC18.89■□□□□ 0.61
SYN1P17600 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC18.89■□□□□ 0.61
SYN1P17600 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC18.88■□□□□ 0.61
SYN1P17600 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
SYN1P17600 HARS-203ENST00000431330 1774 ntTSL 2 BASIC18.88■□□□□ 0.61
SYN1P17600 PHGDH-209ENST00000641074 1780 ntBASIC18.88■□□□□ 0.61
SYN1P17600 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SYN1P17600 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SYN1P17600 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SYN1P17600 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SYN1P17600 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SYN1P17600 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
SYN1P17600 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
SYN1P17600 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC18.88■□□□□ 0.61
SYN1P17600 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
SYN1P17600 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC18.88■□□□□ 0.61
SYN1P17600 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC18.88■□□□□ 0.61
SYN1P17600 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC18.88■□□□□ 0.61
SYN1P17600 LINC01225-203ENST00000563550 1244 ntBASIC18.88■□□□□ 0.61
SYN1P17600 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC18.88■□□□□ 0.61
SYN1P17600 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC18.88■□□□□ 0.61
SYN1P17600 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC18.88■□□□□ 0.61
SYN1P17600 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
SYN1P17600 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC18.88■□□□□ 0.61
SYN1P17600 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SYN1P17600 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
SYN1P17600 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SYN1P17600 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SYN1P17600 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SYN1P17600 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
SYN1P17600 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SYN1P17600 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC18.88■□□□□ 0.61
SYN1P17600 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC18.88■□□□□ 0.61
SYN1P17600 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC18.88■□□□□ 0.61
SYN1P17600 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SYN1P17600 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SYN1P17600 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
SYN1P17600 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
SYN1P17600 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SYN1P17600 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SYN1P17600 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SYN1P17600 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC18.87■□□□□ 0.61
SYN1P17600 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
SYN1P17600 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC18.87■□□□□ 0.61
SYN1P17600 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC18.87■□□□□ 0.61
SYN1P17600 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC18.87■□□□□ 0.61
SYN1P17600 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC18.87■□□□□ 0.61
SYN1P17600 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SYN1P17600 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SYN1P17600 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SYN1P17600 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SYN1P17600 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SYN1P17600 SP100-208ENST00000427101 1922 ntTSL 2 BASIC18.86■□□□□ 0.61
SYN1P17600 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC18.86■□□□□ 0.61
SYN1P17600 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC18.86■□□□□ 0.61
SYN1P17600 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
SYN1P17600 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC18.86■□□□□ 0.61
SYN1P17600 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC18.86■□□□□ 0.61
SYN1P17600 DUTP2-201ENST00000519164 463 ntBASIC18.86■□□□□ 0.61
SYN1P17600 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC18.86■□□□□ 0.61
SYN1P17600 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SYN1P17600 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC18.86■□□□□ 0.61
SYN1P17600 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SYN1P17600 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
SYN1P17600 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
SYN1P17600 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC18.86■□□□□ 0.61
SYN1P17600 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
SYN1P17600 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC18.86■□□□□ 0.61
SYN1P17600 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SYN1P17600 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SYN1P17600 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SYN1P17600 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SYN1P17600 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SYN1P17600 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SYN1P17600 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SYN1P17600 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
SYN1P17600 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC18.85■□□□□ 0.61
SYN1P17600 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SYN1P17600 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SYN1P17600 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
SYN1P17600 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SYN1P17600 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SYN1P17600 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms