Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC16.38■□□□□ 0.21
PDGFAP04085 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
PDGFAP04085 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC16.38■□□□□ 0.21
PDGFAP04085 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC16.38■□□□□ 0.21
PDGFAP04085 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
PDGFAP04085 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
PDGFAP04085 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PDGFAP04085 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PDGFAP04085 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PDGFAP04085 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC16.38■□□□□ 0.21
PDGFAP04085 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC16.38■□□□□ 0.21
PDGFAP04085 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC16.38■□□□□ 0.21
PDGFAP04085 HNRNPA1P28-201ENST00000424481 961 ntBASIC16.38■□□□□ 0.21
PDGFAP04085 AC007967.3-201ENST00000434308 558 ntBASIC16.38■□□□□ 0.21
PDGFAP04085 DNAJB3-202ENST00000449667 1266 ntBASIC16.38■□□□□ 0.21
PDGFAP04085 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC16.38■□□□□ 0.21
PDGFAP04085 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC16.38■□□□□ 0.21
PDGFAP04085 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC16.38■□□□□ 0.21
PDGFAP04085 AC004817.3-201ENST00000602957 2129 ntBASIC16.38■□□□□ 0.21
PDGFAP04085 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PDGFAP04085 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC16.38■□□□□ 0.21
PDGFAP04085 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PDGFAP04085 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PDGFAP04085 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PDGFAP04085 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PDGFAP04085 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC16.38■□□□□ 0.21
PDGFAP04085 AC022898.2-201ENST00000616822 1312 ntBASIC16.38■□□□□ 0.21
PDGFAP04085 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
PDGFAP04085 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
PDGFAP04085 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PDGFAP04085 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
PDGFAP04085 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
PDGFAP04085 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC16.38■□□□□ 0.21
PDGFAP04085 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
PDGFAP04085 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
PDGFAP04085 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PDGFAP04085 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PDGFAP04085 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PDGFAP04085 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
PDGFAP04085 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
PDGFAP04085 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC16.37■□□□□ 0.21
PDGFAP04085 PCDHA12-202ENST00000613593 2588 ntBASIC16.37■□□□□ 0.21
PDGFAP04085 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC16.37■□□□□ 0.21
PDGFAP04085 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PDGFAP04085 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PDGFAP04085 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
PDGFAP04085 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PDGFAP04085 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PDGFAP04085 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
PDGFAP04085 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PDGFAP04085 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
PDGFAP04085 KIRREL3-AS3-201ENST00000404882 831 ntBASIC16.37■□□□□ 0.21
PDGFAP04085 SRP19-202ENST00000445150 833 ntTSL 2 BASIC16.37■□□□□ 0.21
PDGFAP04085 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC16.37■□□□□ 0.21
PDGFAP04085 MSRA-206ENST00000521209 814 ntTSL 3 BASIC16.37■□□□□ 0.21
PDGFAP04085 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC16.37■□□□□ 0.21
PDGFAP04085 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC16.37■□□□□ 0.21
PDGFAP04085 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC16.37■□□□□ 0.21
PDGFAP04085 AC002347.1-201ENST00000569543 541 ntBASIC16.37■□□□□ 0.21
PDGFAP04085 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC16.37■□□□□ 0.21
PDGFAP04085 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC16.37■□□□□ 0.21
PDGFAP04085 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC16.37■□□□□ 0.21
PDGFAP04085 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC16.37■□□□□ 0.21
PDGFAP04085 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PDGFAP04085 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PDGFAP04085 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
PDGFAP04085 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
PDGFAP04085 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC16.37■□□□□ 0.21
PDGFAP04085 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PDGFAP04085 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PDGFAP04085 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PDGFAP04085 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PDGFAP04085 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
PDGFAP04085 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PDGFAP04085 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PDGFAP04085 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PDGFAP04085 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
PDGFAP04085 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PDGFAP04085 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PDGFAP04085 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
PDGFAP04085 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PDGFAP04085 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
PDGFAP04085 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PDGFAP04085 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
PDGFAP04085 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PDGFAP04085 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC16.36■□□□□ 0.21
PDGFAP04085 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PDGFAP04085 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC16.36■□□□□ 0.21
PDGFAP04085 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
PDGFAP04085 AC079781.4-201ENST00000641908 219 ntBASIC16.36■□□□□ 0.21
PDGFAP04085 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PDGFAP04085 COBL-210ENST00000632460 1941 ntTSL 5 BASIC16.36■□□□□ 0.21
PDGFAP04085 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PDGFAP04085 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
PDGFAP04085 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
PDGFAP04085 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC16.36■□□□□ 0.21
PDGFAP04085 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PDGFAP04085 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC16.36■□□□□ 0.21
PDGFAP04085 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PDGFAP04085 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms