Protein–RNA interactions for Protein: P02788

LTF, Lactotransferrin, humanhuman

Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTFP02788 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LTFP02788 AC148477.5-201ENST00000625164 1645 ntBASIC18.3■□□□□ 0.52
LTFP02788 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
LTFP02788 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LTFP02788 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
LTFP02788 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LTFP02788 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
LTFP02788 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
LTFP02788 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
LTFP02788 LYSMD4-203ENST00000378904 2122 ntBASIC18.29■□□□□ 0.52
LTFP02788 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
LTFP02788 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC18.29■□□□□ 0.52
LTFP02788 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
LTFP02788 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
LTFP02788 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
LTFP02788 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC18.29■□□□□ 0.52
LTFP02788 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
LTFP02788 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
LTFP02788 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LTFP02788 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC18.29■□□□□ 0.52
LTFP02788 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
LTFP02788 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LTFP02788 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
LTFP02788 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LTFP02788 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LTFP02788 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
LTFP02788 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LTFP02788 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
LTFP02788 HIST2H3DP1-201ENST00000401004 416 ntBASIC18.29■□□□□ 0.52
LTFP02788 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
LTFP02788 BX005266.1-201ENST00000473402 457 ntBASIC18.29■□□□□ 0.52
LTFP02788 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
LTFP02788 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC18.29■□□□□ 0.52
LTFP02788 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC18.29■□□□□ 0.52
LTFP02788 VPS51-217ENST00000639871 243 ntTSL 5 BASIC18.29■□□□□ 0.52
LTFP02788 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC18.29■□□□□ 0.52
LTFP02788 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC18.29■□□□□ 0.52
LTFP02788 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
LTFP02788 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LTFP02788 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
LTFP02788 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LTFP02788 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
LTFP02788 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LTFP02788 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LTFP02788 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LTFP02788 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LTFP02788 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC18.28■□□□□ 0.52
LTFP02788 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
LTFP02788 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.28■□□□□ 0.52
LTFP02788 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LTFP02788 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC18.28■□□□□ 0.52
LTFP02788 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LTFP02788 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC18.28■□□□□ 0.52
LTFP02788 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LTFP02788 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC18.28■□□□□ 0.52
LTFP02788 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
LTFP02788 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
LTFP02788 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC18.28■□□□□ 0.52
LTFP02788 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
LTFP02788 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LTFP02788 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
LTFP02788 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LTFP02788 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
LTFP02788 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC18.28■□□□□ 0.52
LTFP02788 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC18.28■□□□□ 0.52
LTFP02788 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
LTFP02788 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
LTFP02788 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC18.28■□□□□ 0.52
LTFP02788 AL160237.2-201ENST00000556165 472 ntBASIC18.28■□□□□ 0.52
LTFP02788 CALM3-211ENST00000598871 561 ntTSL 4 BASIC18.28■□□□□ 0.52
LTFP02788 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC18.28■□□□□ 0.52
LTFP02788 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
LTFP02788 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LTFP02788 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
LTFP02788 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
LTFP02788 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
LTFP02788 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC18.28■□□□□ 0.52
LTFP02788 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LTFP02788 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC18.28■□□□□ 0.52
LTFP02788 AC004817.3-201ENST00000602957 2129 ntBASIC18.28■□□□□ 0.52
LTFP02788 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LTFP02788 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
LTFP02788 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
LTFP02788 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
LTFP02788 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
LTFP02788 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LTFP02788 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC18.27■□□□□ 0.52
LTFP02788 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
LTFP02788 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LTFP02788 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LTFP02788 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LTFP02788 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LTFP02788 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LTFP02788 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LTFP02788 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LTFP02788 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC18.27■□□□□ 0.52
LTFP02788 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
LTFP02788 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
LTFP02788 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
LTFP02788 FAM197Y8-203ENST00000450145 560 ntBASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 65.5 ms