Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
COL2A1P02458 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC20.24■□□□□ 0.83
COL2A1P02458 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC20.24■□□□□ 0.83
COL2A1P02458 AC005412.3-201ENST00000580309 715 ntBASIC20.24■□□□□ 0.83
COL2A1P02458 AC004835.2-201ENST00000603762 682 ntBASIC20.24■□□□□ 0.83
COL2A1P02458 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC20.24■□□□□ 0.83
COL2A1P02458 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC20.24■□□□□ 0.83
COL2A1P02458 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
COL2A1P02458 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
COL2A1P02458 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
COL2A1P02458 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
COL2A1P02458 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
COL2A1P02458 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC20.23■□□□□ 0.83
COL2A1P02458 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
COL2A1P02458 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
COL2A1P02458 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC20.23■□□□□ 0.83
COL2A1P02458 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
COL2A1P02458 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
COL2A1P02458 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
COL2A1P02458 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
COL2A1P02458 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC20.23■□□□□ 0.83
COL2A1P02458 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
COL2A1P02458 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
COL2A1P02458 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
COL2A1P02458 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
COL2A1P02458 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
COL2A1P02458 AL139400.1-201ENST00000366220 510 ntBASIC20.23■□□□□ 0.83
COL2A1P02458 AL645939.2-201ENST00000427340 991 ntBASIC20.23■□□□□ 0.83
COL2A1P02458 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC20.23■□□□□ 0.83
COL2A1P02458 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC20.23■□□□□ 0.83
COL2A1P02458 AC023141.5-201ENST00000458585 616 ntBASIC20.23■□□□□ 0.83
COL2A1P02458 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC20.23■□□□□ 0.83
COL2A1P02458 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC20.23■□□□□ 0.83
COL2A1P02458 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC20.23■□□□□ 0.83
COL2A1P02458 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
COL2A1P02458 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC20.23■□□□□ 0.83
COL2A1P02458 AC009093.7-201ENST00000623853 1223 ntBASIC20.23■□□□□ 0.83
COL2A1P02458 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
COL2A1P02458 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC20.23■□□□□ 0.83
COL2A1P02458 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC20.23■□□□□ 0.83
COL2A1P02458 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
COL2A1P02458 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC20.23■□□□□ 0.83
COL2A1P02458 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
COL2A1P02458 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
COL2A1P02458 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
COL2A1P02458 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
COL2A1P02458 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
COL2A1P02458 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC20.22■□□□□ 0.83
COL2A1P02458 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
COL2A1P02458 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC20.22■□□□□ 0.83
COL2A1P02458 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
COL2A1P02458 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC20.22■□□□□ 0.83
COL2A1P02458 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
COL2A1P02458 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC20.22■□□□□ 0.83
COL2A1P02458 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
COL2A1P02458 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC20.22■□□□□ 0.83
COL2A1P02458 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC20.22■□□□□ 0.83
COL2A1P02458 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
COL2A1P02458 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC20.22■□□□□ 0.83
COL2A1P02458 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC20.22■□□□□ 0.83
COL2A1P02458 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
COL2A1P02458 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC20.22■□□□□ 0.83
COL2A1P02458 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC20.22■□□□□ 0.83
COL2A1P02458 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC20.22■□□□□ 0.83
COL2A1P02458 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
COL2A1P02458 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC20.22■□□□□ 0.83
COL2A1P02458 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
COL2A1P02458 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC20.22■□□□□ 0.83
COL2A1P02458 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC20.22■□□□□ 0.83
COL2A1P02458 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
COL2A1P02458 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
COL2A1P02458 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
COL2A1P02458 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
COL2A1P02458 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
COL2A1P02458 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
COL2A1P02458 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC20.21■□□□□ 0.83
COL2A1P02458 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC20.21■□□□□ 0.83
COL2A1P02458 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC20.21■□□□□ 0.83
COL2A1P02458 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
COL2A1P02458 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
COL2A1P02458 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC20.21■□□□□ 0.83
COL2A1P02458 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC20.21■□□□□ 0.83
COL2A1P02458 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
COL2A1P02458 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC20.21■□□□□ 0.83
COL2A1P02458 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC20.21■□□□□ 0.83
COL2A1P02458 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC20.21■□□□□ 0.83
COL2A1P02458 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC20.21■□□□□ 0.83
COL2A1P02458 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
COL2A1P02458 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
COL2A1P02458 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC20.21■□□□□ 0.83
COL2A1P02458 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC20.21■□□□□ 0.83
COL2A1P02458 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
COL2A1P02458 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC20.2■□□□□ 0.82
COL2A1P02458 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
COL2A1P02458 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
COL2A1P02458 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
COL2A1P02458 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
COL2A1P02458 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC20.2■□□□□ 0.82
COL2A1P02458 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
COL2A1P02458 AL355312.1-201ENST00000407115 2176 ntBASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms