Protein–RNA interactions for Protein: P01733

TRBV12-3, T-cell receptor beta chain V region YT35, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV12-3P01733 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC13.53□□□□□ -0.24
TRBV12-3P01733 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC13.53□□□□□ -0.24
TRBV12-3P01733 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC13.53□□□□□ -0.24
TRBV12-3P01733 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC13.53□□□□□ -0.24
TRBV12-3P01733 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRBV12-3P01733 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRBV12-3P01733 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRBV12-3P01733 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
TRBV12-3P01733 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC13.53□□□□□ -0.24
TRBV12-3P01733 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TRBV12-3P01733 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRBV12-3P01733 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC13.53□□□□□ -0.24
TRBV12-3P01733 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC13.53□□□□□ -0.24
TRBV12-3P01733 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC13.53□□□□□ -0.24
TRBV12-3P01733 EMBP1-201ENST00000458200 901 ntBASIC13.53□□□□□ -0.24
TRBV12-3P01733 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC13.53□□□□□ -0.24
TRBV12-3P01733 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRBV12-3P01733 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC13.53□□□□□ -0.24
TRBV12-3P01733 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC13.53□□□□□ -0.24
TRBV12-3P01733 AC111152.3-201ENST00000569699 673 ntBASIC13.53□□□□□ -0.24
TRBV12-3P01733 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC13.53□□□□□ -0.24
TRBV12-3P01733 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC13.53□□□□□ -0.24
TRBV12-3P01733 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TRBV12-3P01733 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TRBV12-3P01733 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC13.53□□□□□ -0.24
TRBV12-3P01733 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TRBV12-3P01733 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRBV12-3P01733 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRBV12-3P01733 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRBV12-3P01733 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRBV12-3P01733 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRBV12-3P01733 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRBV12-3P01733 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRBV12-3P01733 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC13.53□□□□□ -0.24
TRBV12-3P01733 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC13.53□□□□□ -0.24
TRBV12-3P01733 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC13.53□□□□□ -0.24
TRBV12-3P01733 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
TRBV12-3P01733 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
TRBV12-3P01733 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRBV12-3P01733 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TRBV12-3P01733 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC13.53□□□□□ -0.24
TRBV12-3P01733 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRBV12-3P01733 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRBV12-3P01733 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
TRBV12-3P01733 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
TRBV12-3P01733 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
TRBV12-3P01733 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
TRBV12-3P01733 BOC-212ENST00000485230 2173 ntTSL 2 BASIC13.52□□□□□ -0.24
TRBV12-3P01733 OR6D1P-202ENST00000641007 5290 ntBASIC13.52□□□□□ -0.24
TRBV12-3P01733 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
TRBV12-3P01733 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.24
TRBV12-3P01733 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC13.52□□□□□ -0.24
TRBV12-3P01733 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.24
TRBV12-3P01733 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRBV12-3P01733 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRBV12-3P01733 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
TRBV12-3P01733 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC13.52□□□□□ -0.25
TRBV12-3P01733 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC13.52□□□□□ -0.25
TRBV12-3P01733 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRBV12-3P01733 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC13.52□□□□□ -0.25
TRBV12-3P01733 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC13.52□□□□□ -0.25
TRBV12-3P01733 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.25
TRBV12-3P01733 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRBV12-3P01733 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC13.52□□□□□ -0.25
TRBV12-3P01733 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
TRBV12-3P01733 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
TRBV12-3P01733 LINC01711-201ENST00000598340 967 ntBASIC13.52□□□□□ -0.25
TRBV12-3P01733 REXO1L6P-202ENST00000619970 1078 ntBASIC13.52□□□□□ -0.25
TRBV12-3P01733 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC13.52□□□□□ -0.25
TRBV12-3P01733 AP000867.4-201ENST00000641616 219 ntBASIC13.52□□□□□ -0.25
TRBV12-3P01733 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC13.52□□□□□ -0.25
TRBV12-3P01733 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
TRBV12-3P01733 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
TRBV12-3P01733 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC13.52□□□□□ -0.25
TRBV12-3P01733 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC13.52□□□□□ -0.25
TRBV12-3P01733 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRBV12-3P01733 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRBV12-3P01733 PMPCAP1-201ENST00000508114 1576 ntBASIC13.52□□□□□ -0.25
TRBV12-3P01733 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC13.52□□□□□ -0.25
TRBV12-3P01733 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRBV12-3P01733 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRBV12-3P01733 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRBV12-3P01733 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC13.52□□□□□ -0.25
TRBV12-3P01733 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRBV12-3P01733 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC13.52□□□□□ -0.25
TRBV12-3P01733 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.25
TRBV12-3P01733 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC13.52□□□□□ -0.25
TRBV12-3P01733 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
TRBV12-3P01733 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
TRBV12-3P01733 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC13.52□□□□□ -0.25
TRBV12-3P01733 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC13.52□□□□□ -0.25
TRBV12-3P01733 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRBV12-3P01733 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRBV12-3P01733 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRBV12-3P01733 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRBV12-3P01733 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC13.51□□□□□ -0.25
TRBV12-3P01733 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRBV12-3P01733 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
TRBV12-3P01733 AC139713.2-201ENST00000641328 2723 ntBASIC13.51□□□□□ -0.25
TRBV12-3P01733 AC004817.3-201ENST00000602957 2129 ntBASIC13.51□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 62.7 ms