Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC16.57■□□□□ 0.24
CLPTM1O96005 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC16.57■□□□□ 0.24
CLPTM1O96005 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC16.57■□□□□ 0.24
CLPTM1O96005 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC16.57■□□□□ 0.24
CLPTM1O96005 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC16.57■□□□□ 0.24
CLPTM1O96005 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC16.57■□□□□ 0.24
CLPTM1O96005 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC16.57■□□□□ 0.24
CLPTM1O96005 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CLPTM1O96005 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC16.57■□□□□ 0.24
CLPTM1O96005 REXO1L10P-201ENST00000615707 1290 ntBASIC16.57■□□□□ 0.24
CLPTM1O96005 REXO1L12P-201ENST00000622156 912 ntBASIC16.57■□□□□ 0.24
CLPTM1O96005 AC079328.2-201ENST00000561241 3354 ntBASIC16.57■□□□□ 0.24
CLPTM1O96005 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CLPTM1O96005 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
CLPTM1O96005 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
CLPTM1O96005 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CLPTM1O96005 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CLPTM1O96005 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CLPTM1O96005 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CLPTM1O96005 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC16.57■□□□□ 0.24
CLPTM1O96005 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CLPTM1O96005 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CLPTM1O96005 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CLPTM1O96005 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLPTM1O96005 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC16.56■□□□□ 0.24
CLPTM1O96005 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC16.56■□□□□ 0.24
CLPTM1O96005 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLPTM1O96005 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC16.56■□□□□ 0.24
CLPTM1O96005 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
CLPTM1O96005 CYP2T1P-202ENST00000641596 2535 ntBASIC16.56■□□□□ 0.24
CLPTM1O96005 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
CLPTM1O96005 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CLPTM1O96005 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CLPTM1O96005 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CLPTM1O96005 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLPTM1O96005 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
CLPTM1O96005 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC16.56■□□□□ 0.24
CLPTM1O96005 F11R-206ENST00000621309 4770 ntTSL 5 BASIC16.56■□□□□ 0.24
CLPTM1O96005 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CLPTM1O96005 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC16.56■□□□□ 0.24
CLPTM1O96005 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CLPTM1O96005 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC16.56■□□□□ 0.24
CLPTM1O96005 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC16.56■□□□□ 0.24
CLPTM1O96005 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLPTM1O96005 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CLPTM1O96005 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLPTM1O96005 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC16.56■□□□□ 0.24
CLPTM1O96005 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLPTM1O96005 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLPTM1O96005 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CLPTM1O96005 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC16.56■□□□□ 0.24
CLPTM1O96005 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
CLPTM1O96005 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CLPTM1O96005 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLPTM1O96005 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CLPTM1O96005 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLPTM1O96005 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLPTM1O96005 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
CLPTM1O96005 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
CLPTM1O96005 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CLPTM1O96005 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLPTM1O96005 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
CLPTM1O96005 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
CLPTM1O96005 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CLPTM1O96005 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC16.55■□□□□ 0.24
CLPTM1O96005 PAUPAR-201ENST00000630360 2965 ntBASIC16.55■□□□□ 0.24
CLPTM1O96005 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.55■□□□□ 0.24
CLPTM1O96005 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLPTM1O96005 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
CLPTM1O96005 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLPTM1O96005 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CLPTM1O96005 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC16.55■□□□□ 0.24
CLPTM1O96005 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC16.55■□□□□ 0.24
CLPTM1O96005 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLPTM1O96005 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC16.55■□□□□ 0.24
CLPTM1O96005 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CLPTM1O96005 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC16.55■□□□□ 0.24
CLPTM1O96005 AC011506.1-201ENST00000474329 610 ntBASIC16.55■□□□□ 0.24
CLPTM1O96005 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC16.55■□□□□ 0.24
CLPTM1O96005 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC16.55■□□□□ 0.24
CLPTM1O96005 KRT18P41-201ENST00000518924 1277 ntBASIC16.55■□□□□ 0.24
CLPTM1O96005 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLPTM1O96005 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC16.55■□□□□ 0.24
CLPTM1O96005 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CLPTM1O96005 MIR6786-201ENST00000616843 113 ntBASIC16.55■□□□□ 0.24
CLPTM1O96005 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC16.55■□□□□ 0.24
CLPTM1O96005 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC16.55■□□□□ 0.24
CLPTM1O96005 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLPTM1O96005 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLPTM1O96005 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC16.55■□□□□ 0.24
CLPTM1O96005 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
CLPTM1O96005 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLPTM1O96005 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC16.55■□□□□ 0.24
CLPTM1O96005 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLPTM1O96005 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLPTM1O96005 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC16.55■□□□□ 0.24
CLPTM1O96005 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CLPTM1O96005 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CLPTM1O96005 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CLPTM1O96005 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms