Protein–RNA interactions for Protein: O95983

MBD3, Methyl-CpG-binding domain protein 3, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3O95983 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC20.08■□□□□ 0.81
MBD3O95983 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
MBD3O95983 AC090192.1-201ENST00000517740 490 ntBASIC20.08■□□□□ 0.81
MBD3O95983 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
MBD3O95983 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC20.08■□□□□ 0.81
MBD3O95983 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC20.08■□□□□ 0.8
MBD3O95983 AC092068.3-201ENST00000587894 2016 ntBASIC20.08■□□□□ 0.8
MBD3O95983 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
MBD3O95983 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
MBD3O95983 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
MBD3O95983 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
MBD3O95983 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
MBD3O95983 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
MBD3O95983 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
MBD3O95983 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC20.07■□□□□ 0.8
MBD3O95983 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC20.07■□□□□ 0.8
MBD3O95983 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC20.07■□□□□ 0.8
MBD3O95983 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
MBD3O95983 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
MBD3O95983 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
MBD3O95983 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
MBD3O95983 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
MBD3O95983 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
MBD3O95983 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
MBD3O95983 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
MBD3O95983 ABHD17AP1-201ENST00000358206 933 ntBASIC20.07■□□□□ 0.8
MBD3O95983 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
MBD3O95983 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC20.07■□□□□ 0.8
MBD3O95983 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC20.07■□□□□ 0.8
MBD3O95983 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
MBD3O95983 AC010653.2-201ENST00000623505 997 ntBASIC20.07■□□□□ 0.8
MBD3O95983 AGK-211ENST00000629555 2765 ntTSL 5 BASIC20.07■□□□□ 0.8
MBD3O95983 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
MBD3O95983 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
MBD3O95983 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
MBD3O95983 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
MBD3O95983 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
MBD3O95983 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC20.07■□□□□ 0.8
MBD3O95983 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
MBD3O95983 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
MBD3O95983 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
MBD3O95983 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
MBD3O95983 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC20.07■□□□□ 0.8
MBD3O95983 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
MBD3O95983 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
MBD3O95983 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
MBD3O95983 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
MBD3O95983 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
MBD3O95983 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
MBD3O95983 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC20.06■□□□□ 0.8
MBD3O95983 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC20.06■□□□□ 0.8
MBD3O95983 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC20.06■□□□□ 0.8
MBD3O95983 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC20.06■□□□□ 0.8
MBD3O95983 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
MBD3O95983 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC20.06■□□□□ 0.8
MBD3O95983 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
MBD3O95983 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
MBD3O95983 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
MBD3O95983 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
MBD3O95983 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC20.06■□□□□ 0.8
MBD3O95983 AC124947.2-201ENST00000547118 1133 ntBASIC20.06■□□□□ 0.8
MBD3O95983 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC20.06■□□□□ 0.8
MBD3O95983 KRT8P9-201ENST00000558927 1449 ntBASIC20.06■□□□□ 0.8
MBD3O95983 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
MBD3O95983 TK1-204ENST00000590430 683 ntTSL 3 BASIC20.06■□□□□ 0.8
MBD3O95983 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC20.06■□□□□ 0.8
MBD3O95983 AP001412.1-201ENST00000608405 714 ntBASIC20.06■□□□□ 0.8
MBD3O95983 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
MBD3O95983 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
MBD3O95983 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
MBD3O95983 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
MBD3O95983 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
MBD3O95983 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
MBD3O95983 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
MBD3O95983 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
MBD3O95983 KRT89P-201ENST00000620027 1478 ntBASIC20.05■□□□□ 0.8
MBD3O95983 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
MBD3O95983 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC20.05■□□□□ 0.8
MBD3O95983 AC008741.2-201ENST00000612792 3115 ntBASIC20.05■□□□□ 0.8
MBD3O95983 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
MBD3O95983 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
MBD3O95983 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
MBD3O95983 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC20.05■□□□□ 0.8
MBD3O95983 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC20.05■□□□□ 0.8
MBD3O95983 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
MBD3O95983 HES2-202ENST00000377836 507 ntTSL 2 BASIC20.05■□□□□ 0.8
MBD3O95983 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
MBD3O95983 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
MBD3O95983 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
MBD3O95983 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC20.05■□□□□ 0.8
MBD3O95983 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC20.05■□□□□ 0.8
MBD3O95983 AC113410.3-201ENST00000623366 203 ntBASIC20.05■□□□□ 0.8
MBD3O95983 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
MBD3O95983 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC20.05■□□□□ 0.8
MBD3O95983 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
MBD3O95983 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
MBD3O95983 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
MBD3O95983 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
MBD3O95983 AL513523.2-202ENST00000427283 2040 ntBASIC20.05■□□□□ 0.8
MBD3O95983 AC092171.3-201ENST00000610122 2651 ntBASIC20.05■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms