Protein–RNA interactions for Protein: O94782

USP1, Ubiquitin carboxyl-terminal hydrolase 1, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP1O94782 RNF146-204ENST00000476956 884 ntTSL 2 BASIC17.75■□□□□ 0.43
USP1O94782 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
USP1O94782 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC17.75■□□□□ 0.43
USP1O94782 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
USP1O94782 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC17.75■□□□□ 0.43
USP1O94782 ADM-208ENST00000534464 1640 ntTSL 2 BASIC17.75■□□□□ 0.43
USP1O94782 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
USP1O94782 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
USP1O94782 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
USP1O94782 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
USP1O94782 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
USP1O94782 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
USP1O94782 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC17.75■□□□□ 0.43
USP1O94782 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
USP1O94782 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
USP1O94782 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
USP1O94782 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
USP1O94782 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
USP1O94782 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
USP1O94782 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
USP1O94782 AC046158.3-201ENST00000624947 2558 ntBASIC17.74■□□□□ 0.43
USP1O94782 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
USP1O94782 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC17.74■□□□□ 0.43
USP1O94782 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC17.74■□□□□ 0.43
USP1O94782 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
USP1O94782 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
USP1O94782 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
USP1O94782 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC17.74■□□□□ 0.43
USP1O94782 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC17.74■□□□□ 0.43
USP1O94782 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC17.74■□□□□ 0.43
USP1O94782 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC17.74■□□□□ 0.43
USP1O94782 NTF6B-201ENST00000591913 560 ntBASIC17.74■□□□□ 0.43
USP1O94782 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC17.74■□□□□ 0.43
USP1O94782 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
USP1O94782 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
USP1O94782 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
USP1O94782 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
USP1O94782 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
USP1O94782 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
USP1O94782 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
USP1O94782 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
USP1O94782 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
USP1O94782 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
USP1O94782 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
USP1O94782 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
USP1O94782 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
USP1O94782 TBC1D3P5-201ENST00000579401 1545 ntBASIC17.73■□□□□ 0.43
USP1O94782 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
USP1O94782 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC17.73■□□□□ 0.43
USP1O94782 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC17.73■□□□□ 0.43
USP1O94782 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
USP1O94782 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
USP1O94782 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
USP1O94782 CNP-204ENST00000472031 1019 ntTSL 2 BASIC17.73■□□□□ 0.43
USP1O94782 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC17.73■□□□□ 0.43
USP1O94782 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC17.73■□□□□ 0.43
USP1O94782 AC087388.1-201ENST00000571370 1112 ntBASIC17.73■□□□□ 0.43
USP1O94782 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
USP1O94782 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC17.73■□□□□ 0.43
USP1O94782 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC17.73■□□□□ 0.43
USP1O94782 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
USP1O94782 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
USP1O94782 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
USP1O94782 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
USP1O94782 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.73■□□□□ 0.43
USP1O94782 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC17.73■□□□□ 0.43
USP1O94782 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC17.73■□□□□ 0.43
USP1O94782 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
USP1O94782 UBC-206ENST00000538617 1303 ntTSL 5 BASIC17.72■□□□□ 0.43
USP1O94782 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC17.72■□□□□ 0.43
USP1O94782 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
USP1O94782 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC17.72■□□□□ 0.43
USP1O94782 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
USP1O94782 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
USP1O94782 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC17.72■□□□□ 0.43
USP1O94782 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
USP1O94782 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC17.72■□□□□ 0.43
USP1O94782 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
USP1O94782 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC17.72■□□□□ 0.43
USP1O94782 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
USP1O94782 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
USP1O94782 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
USP1O94782 COX5BP2-201ENST00000392354 334 ntBASIC17.72■□□□□ 0.43
USP1O94782 AL671277.2-201ENST00000458060 996 ntBASIC17.72■□□□□ 0.43
USP1O94782 AC002558.1-201ENST00000488906 803 ntBASIC17.72■□□□□ 0.43
USP1O94782 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC17.72■□□□□ 0.43
USP1O94782 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
USP1O94782 CLN6-204ENST00000564752 900 ntTSL 3 BASIC17.72■□□□□ 0.43
USP1O94782 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC17.72■□□□□ 0.43
USP1O94782 TMED1-207ENST00000591695 809 ntTSL 5 BASIC17.72■□□□□ 0.43
USP1O94782 AL139327.4-201ENST00000612362 153 ntBASIC17.72■□□□□ 0.43
USP1O94782 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC17.72■□□□□ 0.43
USP1O94782 CLN6-214ENST00000636314 442 ntTSL 3 BASIC17.72■□□□□ 0.43
USP1O94782 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
USP1O94782 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
USP1O94782 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
USP1O94782 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
USP1O94782 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC17.72■□□□□ 0.43
USP1O94782 PC-208ENST00000529047 1607 ntTSL 3 BASIC17.72■□□□□ 0.43
USP1O94782 AL121761.2-201ENST00000598007 1648 ntBASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms