Protein–RNA interactions for Protein: O60890

OPHN1, Oligophrenin-1, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPHN1O60890 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
OPHN1O60890 MRPL3P1-201ENST00000400109 1033 ntBASIC18.3■□□□□ 0.52
OPHN1O60890 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
OPHN1O60890 KRT16P4-201ENST00000453883 522 ntBASIC18.3■□□□□ 0.52
OPHN1O60890 AP003733.1-201ENST00000491725 852 ntBASIC18.3■□□□□ 0.52
OPHN1O60890 PPOX-214ENST00000535223 664 ntTSL 3 BASIC18.3■□□□□ 0.52
OPHN1O60890 AC099336.1-202ENST00000602961 463 ntBASIC18.3■□□□□ 0.52
OPHN1O60890 BX640515.1-201ENST00000617215 977 ntBASIC18.3■□□□□ 0.52
OPHN1O60890 AC009154.2-201ENST00000621177 724 ntBASIC18.3■□□□□ 0.52
OPHN1O60890 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC18.3■□□□□ 0.52
OPHN1O60890 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
OPHN1O60890 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
OPHN1O60890 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
OPHN1O60890 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC18.3■□□□□ 0.52
OPHN1O60890 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
OPHN1O60890 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC18.3■□□□□ 0.52
OPHN1O60890 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
OPHN1O60890 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC18.3■□□□□ 0.52
OPHN1O60890 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
OPHN1O60890 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
OPHN1O60890 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
OPHN1O60890 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
OPHN1O60890 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
OPHN1O60890 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
OPHN1O60890 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
OPHN1O60890 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
OPHN1O60890 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
OPHN1O60890 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
OPHN1O60890 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
OPHN1O60890 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
OPHN1O60890 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC18.29■□□□□ 0.52
OPHN1O60890 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
OPHN1O60890 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
OPHN1O60890 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
OPHN1O60890 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
OPHN1O60890 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC18.29■□□□□ 0.52
OPHN1O60890 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
OPHN1O60890 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
OPHN1O60890 DDT-203ENST00000403754 569 ntTSL 3 BASIC18.29■□□□□ 0.52
OPHN1O60890 DDT-206ENST00000430101 573 ntTSL 2 BASIC18.29■□□□□ 0.52
OPHN1O60890 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC18.29■□□□□ 0.52
OPHN1O60890 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC18.29■□□□□ 0.52
OPHN1O60890 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
OPHN1O60890 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC18.29■□□□□ 0.52
OPHN1O60890 AC005332.3-201ENST00000589904 676 ntBASIC18.29■□□□□ 0.52
OPHN1O60890 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
OPHN1O60890 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
OPHN1O60890 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC18.29■□□□□ 0.52
OPHN1O60890 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC18.29■□□□□ 0.52
OPHN1O60890 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
OPHN1O60890 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC18.29■□□□□ 0.52
OPHN1O60890 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
OPHN1O60890 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC18.28■□□□□ 0.52
OPHN1O60890 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
OPHN1O60890 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
OPHN1O60890 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
OPHN1O60890 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC18.28■□□□□ 0.52
OPHN1O60890 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
OPHN1O60890 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
OPHN1O60890 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
OPHN1O60890 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
OPHN1O60890 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
OPHN1O60890 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
OPHN1O60890 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
OPHN1O60890 AL590627.1-203ENST00000421194 1026 ntBASIC18.28■□□□□ 0.52
OPHN1O60890 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC18.28■□□□□ 0.52
OPHN1O60890 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
OPHN1O60890 AC064862.7-201ENST00000604520 867 ntBASIC18.28■□□□□ 0.52
OPHN1O60890 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
OPHN1O60890 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
OPHN1O60890 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
OPHN1O60890 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC18.28■□□□□ 0.52
OPHN1O60890 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
OPHN1O60890 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC18.28■□□□□ 0.52
OPHN1O60890 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
OPHN1O60890 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
OPHN1O60890 AC233702.3-201ENST00000578656 1387 ntBASIC18.28■□□□□ 0.52
OPHN1O60890 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
OPHN1O60890 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
OPHN1O60890 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
OPHN1O60890 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
OPHN1O60890 HLA-A-201ENST00000376802 1334 ntBASIC18.27■□□□□ 0.52
OPHN1O60890 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.52
OPHN1O60890 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
OPHN1O60890 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC18.27■□□□□ 0.52
OPHN1O60890 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC18.27■□□□□ 0.52
OPHN1O60890 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
OPHN1O60890 IGHGP-201ENST00000390555 1178 ntBASIC18.27■□□□□ 0.52
OPHN1O60890 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC18.27■□□□□ 0.52
OPHN1O60890 TSPY12P-201ENST00000421279 868 ntBASIC18.27■□□□□ 0.52
OPHN1O60890 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
OPHN1O60890 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
OPHN1O60890 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC18.27■□□□□ 0.52
OPHN1O60890 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC18.27■□□□□ 0.52
OPHN1O60890 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC18.27■□□□□ 0.52
OPHN1O60890 VPS51-217ENST00000639871 243 ntTSL 5 BASIC18.27■□□□□ 0.52
OPHN1O60890 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
OPHN1O60890 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
OPHN1O60890 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
OPHN1O60890 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms