Protein–RNA interactions for Protein: O43623

SNAI2, Zinc finger protein SNAI2, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI2O43623 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SNAI2O43623 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SNAI2O43623 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
SNAI2O43623 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC13.15□□□□□ -0.3
SNAI2O43623 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC13.15□□□□□ -0.3
SNAI2O43623 AC116562.2-201ENST00000507042 360 ntBASIC13.15□□□□□ -0.3
SNAI2O43623 C1QBPP2-201ENST00000528754 825 ntBASIC13.15□□□□□ -0.3
SNAI2O43623 WWOX-216ENST00000569818 525 ntBASIC13.15□□□□□ -0.3
SNAI2O43623 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC13.15□□□□□ -0.3
SNAI2O43623 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC13.15□□□□□ -0.3
SNAI2O43623 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SNAI2O43623 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
SNAI2O43623 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
SNAI2O43623 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC13.15□□□□□ -0.3
SNAI2O43623 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
SNAI2O43623 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC13.15□□□□□ -0.3
SNAI2O43623 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
SNAI2O43623 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
SNAI2O43623 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC13.15□□□□□ -0.3
SNAI2O43623 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SNAI2O43623 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC13.15□□□□□ -0.3
SNAI2O43623 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC13.15□□□□□ -0.3
SNAI2O43623 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
SNAI2O43623 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
SNAI2O43623 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
SNAI2O43623 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
SNAI2O43623 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
SNAI2O43623 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
SNAI2O43623 AC132938.6-201ENST00000623828 1655 ntBASIC13.15□□□□□ -0.31
SNAI2O43623 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
SNAI2O43623 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
SNAI2O43623 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
SNAI2O43623 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC13.14□□□□□ -0.31
SNAI2O43623 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC13.14□□□□□ -0.31
SNAI2O43623 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SNAI2O43623 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
SNAI2O43623 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC13.14□□□□□ -0.31
SNAI2O43623 AC100803.2-201ENST00000562459 1963 ntBASIC13.14□□□□□ -0.31
SNAI2O43623 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC13.14□□□□□ -0.31
SNAI2O43623 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC13.14□□□□□ -0.31
SNAI2O43623 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
SNAI2O43623 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SNAI2O43623 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
SNAI2O43623 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
SNAI2O43623 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC13.14□□□□□ -0.31
SNAI2O43623 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
SNAI2O43623 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
SNAI2O43623 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
SNAI2O43623 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
SNAI2O43623 PCDHA14-201ENST00000506751 2298 ntBASIC13.14□□□□□ -0.31
SNAI2O43623 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SNAI2O43623 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
SNAI2O43623 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
SNAI2O43623 AC007326.2-201ENST00000624224 7579 ntBASIC13.14□□□□□ -0.31
SNAI2O43623 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SNAI2O43623 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SNAI2O43623 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SNAI2O43623 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SNAI2O43623 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC13.14□□□□□ -0.31
SNAI2O43623 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
SNAI2O43623 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SNAI2O43623 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
SNAI2O43623 AC104390.1-201ENST00000555663 520 ntBASIC13.14□□□□□ -0.31
SNAI2O43623 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC13.14□□□□□ -0.31
SNAI2O43623 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC13.14□□□□□ -0.31
SNAI2O43623 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
SNAI2O43623 CYGB-204ENST00000589342 815 ntTSL 3 BASIC13.14□□□□□ -0.31
SNAI2O43623 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SNAI2O43623 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC13.14□□□□□ -0.31
SNAI2O43623 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
SNAI2O43623 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC13.14□□□□□ -0.31
SNAI2O43623 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC13.14□□□□□ -0.31
SNAI2O43623 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
SNAI2O43623 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
SNAI2O43623 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SNAI2O43623 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
SNAI2O43623 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
SNAI2O43623 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SNAI2O43623 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SNAI2O43623 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
SNAI2O43623 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
SNAI2O43623 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SNAI2O43623 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SNAI2O43623 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
SNAI2O43623 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
SNAI2O43623 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
SNAI2O43623 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC13.13□□□□□ -0.31
SNAI2O43623 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
SNAI2O43623 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
SNAI2O43623 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
SNAI2O43623 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SNAI2O43623 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SNAI2O43623 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC13.13□□□□□ -0.31
SNAI2O43623 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SNAI2O43623 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC13.13□□□□□ -0.31
SNAI2O43623 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC13.13□□□□□ -0.31
SNAI2O43623 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
SNAI2O43623 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
SNAI2O43623 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
SNAI2O43623 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC13.13□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms