Protein–RNA interactions for Protein: O00585

CCL21, C-C motif chemokine 21, humanhuman

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL21O00585 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
CCL21O00585 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC15.35■□□□□ 0.05
CCL21O00585 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CCL21O00585 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
CCL21O00585 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC15.34■□□□□ 0.05
CCL21O00585 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
CCL21O00585 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CCL21O00585 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CCL21O00585 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CCL21O00585 AC090340.1-201ENST00000620778 4980 ntBASIC15.34■□□□□ 0.05
CCL21O00585 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CCL21O00585 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC15.34■□□□□ 0.05
CCL21O00585 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CCL21O00585 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CCL21O00585 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC15.34■□□□□ 0.05
CCL21O00585 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CCL21O00585 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CCL21O00585 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CCL21O00585 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CCL21O00585 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC15.34■□□□□ 0.05
CCL21O00585 TIMM8BP1-201ENST00000452384 211 ntBASIC15.34■□□□□ 0.05
CCL21O00585 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC15.34■□□□□ 0.05
CCL21O00585 NMU-203ENST00000507338 658 ntTSL 3 BASIC15.34■□□□□ 0.05
CCL21O00585 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
CCL21O00585 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC15.34■□□□□ 0.05
CCL21O00585 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC15.34■□□□□ 0.05
CCL21O00585 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC15.34■□□□□ 0.05
CCL21O00585 RPL28-205ENST00000558131 444 ntTSL 5 BASIC15.34■□□□□ 0.05
CCL21O00585 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC15.34■□□□□ 0.05
CCL21O00585 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC15.34■□□□□ 0.05
CCL21O00585 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
CCL21O00585 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CCL21O00585 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CCL21O00585 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC15.34■□□□□ 0.05
CCL21O00585 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CCL21O00585 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC15.34■□□□□ 0.05
CCL21O00585 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.05
CCL21O00585 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.05
CCL21O00585 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.05
CCL21O00585 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
CCL21O00585 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
CCL21O00585 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC15.33■□□□□ 0.04
CCL21O00585 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
CCL21O00585 AC092919.2-201ENST00000623631 1645 ntBASIC15.33■□□□□ 0.04
CCL21O00585 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
CCL21O00585 CBR1-202ENST00000399191 838 ntTSL 3 BASIC15.33■□□□□ 0.04
CCL21O00585 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
CCL21O00585 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC15.33■□□□□ 0.04
CCL21O00585 AC244107.1-201ENST00000442033 332 ntBASIC15.33■□□□□ 0.04
CCL21O00585 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
CCL21O00585 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC15.33■□□□□ 0.04
CCL21O00585 PAWRP1-201ENST00000451083 565 ntBASIC15.33■□□□□ 0.04
CCL21O00585 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC15.33■□□□□ 0.04
CCL21O00585 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CCL21O00585 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC15.33■□□□□ 0.04
CCL21O00585 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CCL21O00585 GATB-205ENST00000508611 605 ntTSL 2 BASIC15.33■□□□□ 0.04
CCL21O00585 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC15.33■□□□□ 0.04
CCL21O00585 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
CCL21O00585 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CCL21O00585 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC15.33■□□□□ 0.04
CCL21O00585 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CCL21O00585 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC15.33■□□□□ 0.04
CCL21O00585 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC15.33■□□□□ 0.04
CCL21O00585 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
CCL21O00585 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
CCL21O00585 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CCL21O00585 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CCL21O00585 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CCL21O00585 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC15.33■□□□□ 0.04
CCL21O00585 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CCL21O00585 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC15.33■□□□□ 0.04
CCL21O00585 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.04
CCL21O00585 AC093677.2-201ENST00000600169 1863 ntBASIC15.33■□□□□ 0.04
CCL21O00585 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
CCL21O00585 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC15.33■□□□□ 0.04
CCL21O00585 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC15.33■□□□□ 0.04
CCL21O00585 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCL21O00585 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCL21O00585 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCL21O00585 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CCL21O00585 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
CCL21O00585 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCL21O00585 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCL21O00585 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CCL21O00585 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
CCL21O00585 AC002056.1-201ENST00000395613 760 ntBASIC15.32■□□□□ 0.04
CCL21O00585 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CCL21O00585 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC15.32■□□□□ 0.04
CCL21O00585 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCL21O00585 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC15.32■□□□□ 0.04
CCL21O00585 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC15.32■□□□□ 0.04
CCL21O00585 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
CCL21O00585 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC15.32■□□□□ 0.04
CCL21O00585 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCL21O00585 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCL21O00585 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCL21O00585 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCL21O00585 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC15.32■□□□□ 0.04
CCL21O00585 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms