Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
AP3B1O00203 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC17.69■□□□□ 0.42
AP3B1O00203 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC17.69■□□□□ 0.42
AP3B1O00203 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
AP3B1O00203 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
AP3B1O00203 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
AP3B1O00203 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
AP3B1O00203 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
AP3B1O00203 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
AP3B1O00203 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC17.69■□□□□ 0.42
AP3B1O00203 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
AP3B1O00203 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
AP3B1O00203 AL031133.1-201ENST00000406807 723 ntBASIC17.69■□□□□ 0.42
AP3B1O00203 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC17.69■□□□□ 0.42
AP3B1O00203 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC17.69■□□□□ 0.42
AP3B1O00203 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC17.69■□□□□ 0.42
AP3B1O00203 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC17.69■□□□□ 0.42
AP3B1O00203 NME3-204ENST00000563498 920 ntTSL 2 BASIC17.69■□□□□ 0.42
AP3B1O00203 AL049597.2-201ENST00000565575 961 ntBASIC17.69■□□□□ 0.42
AP3B1O00203 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
AP3B1O00203 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC17.69■□□□□ 0.42
AP3B1O00203 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
AP3B1O00203 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC17.69■□□□□ 0.42
AP3B1O00203 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
AP3B1O00203 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC17.69■□□□□ 0.42
AP3B1O00203 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
AP3B1O00203 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
AP3B1O00203 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
AP3B1O00203 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
AP3B1O00203 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
AP3B1O00203 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC17.69■□□□□ 0.42
AP3B1O00203 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC17.69■□□□□ 0.42
AP3B1O00203 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC17.69■□□□□ 0.42
AP3B1O00203 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC17.69■□□□□ 0.42
AP3B1O00203 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
AP3B1O00203 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC17.69■□□□□ 0.42
AP3B1O00203 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
AP3B1O00203 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
AP3B1O00203 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
AP3B1O00203 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
AP3B1O00203 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
AP3B1O00203 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC17.68■□□□□ 0.42
AP3B1O00203 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC17.68■□□□□ 0.42
AP3B1O00203 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
AP3B1O00203 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
AP3B1O00203 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
AP3B1O00203 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
AP3B1O00203 CCS-201ENST00000310190 942 ntTSL 5 BASIC17.68■□□□□ 0.42
AP3B1O00203 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
AP3B1O00203 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC17.68■□□□□ 0.42
AP3B1O00203 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
AP3B1O00203 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
AP3B1O00203 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC17.68■□□□□ 0.42
AP3B1O00203 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
AP3B1O00203 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
AP3B1O00203 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
AP3B1O00203 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
AP3B1O00203 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC17.68■□□□□ 0.42
AP3B1O00203 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC17.68■□□□□ 0.42
AP3B1O00203 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
AP3B1O00203 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
AP3B1O00203 AC005336.2-201ENST00000593183 939 ntBASIC17.68■□□□□ 0.42
AP3B1O00203 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
AP3B1O00203 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
AP3B1O00203 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
AP3B1O00203 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
AP3B1O00203 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
AP3B1O00203 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
AP3B1O00203 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC17.68■□□□□ 0.42
AP3B1O00203 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
AP3B1O00203 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
AP3B1O00203 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
AP3B1O00203 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
AP3B1O00203 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
AP3B1O00203 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
AP3B1O00203 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC17.67■□□□□ 0.42
AP3B1O00203 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
AP3B1O00203 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
AP3B1O00203 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
AP3B1O00203 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
AP3B1O00203 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
AP3B1O00203 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
AP3B1O00203 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
AP3B1O00203 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
AP3B1O00203 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
AP3B1O00203 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC17.67■□□□□ 0.42
AP3B1O00203 CTNS-203ENST00000399306 803 ntTSL 3 BASIC17.67■□□□□ 0.42
AP3B1O00203 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
AP3B1O00203 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC17.67■□□□□ 0.42
AP3B1O00203 MEG3-211ENST00000452514 461 ntTSL 3 BASIC17.67■□□□□ 0.42
AP3B1O00203 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC17.67■□□□□ 0.42
AP3B1O00203 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC17.67■□□□□ 0.42
AP3B1O00203 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
AP3B1O00203 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC17.67■□□□□ 0.42
AP3B1O00203 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC17.67■□□□□ 0.42
AP3B1O00203 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC17.67■□□□□ 0.42
AP3B1O00203 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
AP3B1O00203 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
AP3B1O00203 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC17.67■□□□□ 0.42
AP3B1O00203 AC046185.3-201ENST00000623228 1824 ntBASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms