Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC66A2RUB6 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC19.03■□□□□ 0.64
CCDC66A2RUB6 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC66A2RUB6 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC66A2RUB6 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC66A2RUB6 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC19.03■□□□□ 0.64
CCDC66A2RUB6 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC19.03■□□□□ 0.64
CCDC66A2RUB6 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC66A2RUB6 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC66A2RUB6 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC66A2RUB6 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC66A2RUB6 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC66A2RUB6 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC66A2RUB6 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC19.02■□□□□ 0.64
CCDC66A2RUB6 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC66A2RUB6 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC19.02■□□□□ 0.64
CCDC66A2RUB6 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC66A2RUB6 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC66A2RUB6 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC66A2RUB6 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC66A2RUB6 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC66A2RUB6 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC66A2RUB6 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC66A2RUB6 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC66A2RUB6 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC19.02■□□□□ 0.64
CCDC66A2RUB6 GXYLT1P6-201ENST00000456472 1187 ntBASIC19.02■□□□□ 0.64
CCDC66A2RUB6 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC66A2RUB6 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC19.02■□□□□ 0.64
CCDC66A2RUB6 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC19.02■□□□□ 0.64
CCDC66A2RUB6 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC19.02■□□□□ 0.64
CCDC66A2RUB6 ETFA-216ENST00000560726 942 ntTSL 3 BASIC19.02■□□□□ 0.64
CCDC66A2RUB6 C2orf69P3-201ENST00000565542 1120 ntBASIC19.02■□□□□ 0.64
CCDC66A2RUB6 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC19.02■□□□□ 0.64
CCDC66A2RUB6 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC19.02■□□□□ 0.64
CCDC66A2RUB6 AP000525.1-201ENST00000608286 694 ntBASIC19.02■□□□□ 0.64
CCDC66A2RUB6 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC66A2RUB6 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC19.02■□□□□ 0.64
CCDC66A2RUB6 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC19.02■□□□□ 0.64
CCDC66A2RUB6 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC66A2RUB6 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
CCDC66A2RUB6 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
CCDC66A2RUB6 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CCDC66A2RUB6 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
CCDC66A2RUB6 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CCDC66A2RUB6 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC19.02■□□□□ 0.63
CCDC66A2RUB6 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC19.01■□□□□ 0.63
CCDC66A2RUB6 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC19.01■□□□□ 0.63
CCDC66A2RUB6 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC66A2RUB6 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC66A2RUB6 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC66A2RUB6 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC66A2RUB6 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC19.01■□□□□ 0.63
CCDC66A2RUB6 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
CCDC66A2RUB6 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC66A2RUB6 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC66A2RUB6 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
CCDC66A2RUB6 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC19.01■□□□□ 0.63
CCDC66A2RUB6 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC66A2RUB6 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
CCDC66A2RUB6 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC19.01■□□□□ 0.63
CCDC66A2RUB6 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
CCDC66A2RUB6 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
CCDC66A2RUB6 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC66A2RUB6 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC66A2RUB6 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC66A2RUB6 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC66A2RUB6 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC66A2RUB6 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC66A2RUB6 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC19.01■□□□□ 0.63
CCDC66A2RUB6 AC010240.3-201ENST00000607688 395 ntBASIC19.01■□□□□ 0.63
CCDC66A2RUB6 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC19.01■□□□□ 0.63
CCDC66A2RUB6 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
CCDC66A2RUB6 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC66A2RUB6 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC66A2RUB6 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC66A2RUB6 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC66A2RUB6 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC19.01■□□□□ 0.63
CCDC66A2RUB6 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC19.01■□□□□ 0.63
CCDC66A2RUB6 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC66A2RUB6 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC19■□□□□ 0.63
CCDC66A2RUB6 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC19■□□□□ 0.63
CCDC66A2RUB6 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC66A2RUB6 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC19■□□□□ 0.63
CCDC66A2RUB6 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC19■□□□□ 0.63
CCDC66A2RUB6 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC19■□□□□ 0.63
CCDC66A2RUB6 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC66A2RUB6 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC19■□□□□ 0.63
CCDC66A2RUB6 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
CCDC66A2RUB6 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC19■□□□□ 0.63
CCDC66A2RUB6 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
CCDC66A2RUB6 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC66A2RUB6 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC66A2RUB6 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC66A2RUB6 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC19■□□□□ 0.63
CCDC66A2RUB6 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC19■□□□□ 0.63
CCDC66A2RUB6 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC66A2RUB6 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC19■□□□□ 0.63
CCDC66A2RUB6 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC66A2RUB6 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
CCDC66A2RUB6 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms