Protein–RNA interactions for Protein: A2A3K4

PTPDC1, Protein tyrosine phosphatase domain-containing protein 1, humanhuman

Predictions only

Length 754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1A2A3K4 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
PTPDC1A2A3K4 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
PTPDC1A2A3K4 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
PTPDC1A2A3K4 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PTPDC1A2A3K4 CCS-201ENST00000310190 942 ntTSL 5 BASIC20.59■□□□□ 0.89
PTPDC1A2A3K4 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
PTPDC1A2A3K4 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PTPDC1A2A3K4 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PTPDC1A2A3K4 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PTPDC1A2A3K4 MEG3-211ENST00000452514 461 ntTSL 3 BASIC20.59■□□□□ 0.89
PTPDC1A2A3K4 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC20.59■□□□□ 0.89
PTPDC1A2A3K4 AC009533.2-201ENST00000543664 586 ntBASIC20.59■□□□□ 0.89
PTPDC1A2A3K4 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC20.59■□□□□ 0.89
PTPDC1A2A3K4 TMED1-207ENST00000591695 809 ntTSL 5 BASIC20.59■□□□□ 0.89
PTPDC1A2A3K4 VPS51-217ENST00000639871 243 ntTSL 5 BASIC20.59■□□□□ 0.89
PTPDC1A2A3K4 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PTPDC1A2A3K4 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC20.59■□□□□ 0.89
PTPDC1A2A3K4 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
PTPDC1A2A3K4 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC20.59■□□□□ 0.89
PTPDC1A2A3K4 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC20.58■□□□□ 0.89
PTPDC1A2A3K4 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
PTPDC1A2A3K4 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
PTPDC1A2A3K4 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PTPDC1A2A3K4 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC20.58■□□□□ 0.89
PTPDC1A2A3K4 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC20.58■□□□□ 0.89
PTPDC1A2A3K4 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
PTPDC1A2A3K4 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC20.58■□□□□ 0.89
PTPDC1A2A3K4 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
PTPDC1A2A3K4 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC20.58■□□□□ 0.89
PTPDC1A2A3K4 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PTPDC1A2A3K4 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PTPDC1A2A3K4 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PTPDC1A2A3K4 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC20.58■□□□□ 0.89
PTPDC1A2A3K4 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC20.58■□□□□ 0.89
PTPDC1A2A3K4 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC20.58■□□□□ 0.89
PTPDC1A2A3K4 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
PTPDC1A2A3K4 AL662844.1-201ENST00000546340 181 ntBASIC20.58■□□□□ 0.89
PTPDC1A2A3K4 AL138831.2-201ENST00000606564 490 ntBASIC20.58■□□□□ 0.89
PTPDC1A2A3K4 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC20.58■□□□□ 0.89
PTPDC1A2A3K4 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
PTPDC1A2A3K4 TP73-AS1-207ENST00000624167 988 ntBASIC20.58■□□□□ 0.89
PTPDC1A2A3K4 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
PTPDC1A2A3K4 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
PTPDC1A2A3K4 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC20.58■□□□□ 0.88
PTPDC1A2A3K4 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC20.58■□□□□ 0.88
PTPDC1A2A3K4 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.88
PTPDC1A2A3K4 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC20.58■□□□□ 0.88
PTPDC1A2A3K4 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
PTPDC1A2A3K4 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
PTPDC1A2A3K4 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PTPDC1A2A3K4 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC20.57■□□□□ 0.88
PTPDC1A2A3K4 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PTPDC1A2A3K4 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC20.57■□□□□ 0.88
PTPDC1A2A3K4 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
PTPDC1A2A3K4 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC20.57■□□□□ 0.88
PTPDC1A2A3K4 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PTPDC1A2A3K4 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC20.57■□□□□ 0.88
PTPDC1A2A3K4 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC20.57■□□□□ 0.88
PTPDC1A2A3K4 AC106795.1-205ENST00000512851 1056 ntBASIC20.57■□□□□ 0.88
PTPDC1A2A3K4 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PTPDC1A2A3K4 COX5A-204ENST00000567270 579 ntTSL 3 BASIC20.57■□□□□ 0.88
PTPDC1A2A3K4 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
PTPDC1A2A3K4 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC20.57■□□□□ 0.88
PTPDC1A2A3K4 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
PTPDC1A2A3K4 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PTPDC1A2A3K4 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PTPDC1A2A3K4 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC20.57■□□□□ 0.88
PTPDC1A2A3K4 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PTPDC1A2A3K4 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
PTPDC1A2A3K4 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
PTPDC1A2A3K4 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC20.56■□□□□ 0.88
PTPDC1A2A3K4 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PTPDC1A2A3K4 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
PTPDC1A2A3K4 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
PTPDC1A2A3K4 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
PTPDC1A2A3K4 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
PTPDC1A2A3K4 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PTPDC1A2A3K4 LYSMD4-203ENST00000378904 2122 ntBASIC20.56■□□□□ 0.88
PTPDC1A2A3K4 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PTPDC1A2A3K4 AC125634.1-201ENST00000438758 1403 ntBASIC20.56■□□□□ 0.88
PTPDC1A2A3K4 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC20.56■□□□□ 0.88
PTPDC1A2A3K4 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PTPDC1A2A3K4 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC20.56■□□□□ 0.88
PTPDC1A2A3K4 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PTPDC1A2A3K4 AP000347.1-202ENST00000435868 847 ntBASIC20.56■□□□□ 0.88
PTPDC1A2A3K4 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC20.56■□□□□ 0.88
PTPDC1A2A3K4 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC20.56■□□□□ 0.88
PTPDC1A2A3K4 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC20.56■□□□□ 0.88
PTPDC1A2A3K4 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC20.56■□□□□ 0.88
PTPDC1A2A3K4 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC20.56■□□□□ 0.88
PTPDC1A2A3K4 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PTPDC1A2A3K4 TBC1D3P5-201ENST00000579401 1545 ntBASIC20.56■□□□□ 0.88
PTPDC1A2A3K4 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PTPDC1A2A3K4 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
PTPDC1A2A3K4 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC20.56■□□□□ 0.88
PTPDC1A2A3K4 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PTPDC1A2A3K4 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
PTPDC1A2A3K4 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC20.55■□□□□ 0.88
PTPDC1A2A3K4 AC097374.2-201ENST00000618617 1306 ntBASIC20.55■□□□□ 0.88
PTPDC1A2A3K4 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms