Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
TCRBV3S1A0A5B6 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TCRBV3S1A0A5B6 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TCRBV3S1A0A5B6 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
TCRBV3S1A0A5B6 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
TCRBV3S1A0A5B6 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TCRBV3S1A0A5B6 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC16.39■□□□□ 0.21
TCRBV3S1A0A5B6 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TCRBV3S1A0A5B6 PRR31-201ENST00000371629 978 ntTSL 2 BASIC16.39■□□□□ 0.21
TCRBV3S1A0A5B6 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
TCRBV3S1A0A5B6 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC16.39■□□□□ 0.21
TCRBV3S1A0A5B6 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TCRBV3S1A0A5B6 BX088651.1-201ENST00000540551 451 ntBASIC16.39■□□□□ 0.21
TCRBV3S1A0A5B6 REXO1L10P-201ENST00000615707 1290 ntBASIC16.39■□□□□ 0.21
TCRBV3S1A0A5B6 REXO1L12P-201ENST00000622156 912 ntBASIC16.39■□□□□ 0.21
TCRBV3S1A0A5B6 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TCRBV3S1A0A5B6 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC16.39■□□□□ 0.21
TCRBV3S1A0A5B6 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC16.39■□□□□ 0.21
TCRBV3S1A0A5B6 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
TCRBV3S1A0A5B6 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TCRBV3S1A0A5B6 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC16.39■□□□□ 0.21
TCRBV3S1A0A5B6 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TCRBV3S1A0A5B6 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
TCRBV3S1A0A5B6 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TCRBV3S1A0A5B6 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
TCRBV3S1A0A5B6 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TCRBV3S1A0A5B6 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
TCRBV3S1A0A5B6 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TCRBV3S1A0A5B6 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC16.39■□□□□ 0.21
TCRBV3S1A0A5B6 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
TCRBV3S1A0A5B6 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
TCRBV3S1A0A5B6 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TCRBV3S1A0A5B6 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TCRBV3S1A0A5B6 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TCRBV3S1A0A5B6 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TCRBV3S1A0A5B6 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
TCRBV3S1A0A5B6 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC16.38■□□□□ 0.21
TCRBV3S1A0A5B6 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC16.38■□□□□ 0.21
TCRBV3S1A0A5B6 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
TCRBV3S1A0A5B6 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TCRBV3S1A0A5B6 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC16.38■□□□□ 0.21
TCRBV3S1A0A5B6 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC16.38■□□□□ 0.21
TCRBV3S1A0A5B6 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TCRBV3S1A0A5B6 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TCRBV3S1A0A5B6 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
TCRBV3S1A0A5B6 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TCRBV3S1A0A5B6 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
TCRBV3S1A0A5B6 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
TCRBV3S1A0A5B6 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
TCRBV3S1A0A5B6 AL135905.2-201ENST00000584934 1404 ntBASIC16.38■□□□□ 0.21
TCRBV3S1A0A5B6 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC16.38■□□□□ 0.21
TCRBV3S1A0A5B6 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TCRBV3S1A0A5B6 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TCRBV3S1A0A5B6 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
TCRBV3S1A0A5B6 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC16.38■□□□□ 0.21
TCRBV3S1A0A5B6 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC16.38■□□□□ 0.21
TCRBV3S1A0A5B6 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
TCRBV3S1A0A5B6 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TCRBV3S1A0A5B6 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TCRBV3S1A0A5B6 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC16.38■□□□□ 0.21
TCRBV3S1A0A5B6 AC128676.1-201ENST00000454392 318 ntBASIC16.38■□□□□ 0.21
TCRBV3S1A0A5B6 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TCRBV3S1A0A5B6 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC16.38■□□□□ 0.21
TCRBV3S1A0A5B6 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC16.38■□□□□ 0.21
TCRBV3S1A0A5B6 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
TCRBV3S1A0A5B6 AC024243.1-201ENST00000609234 778 ntBASIC16.38■□□□□ 0.21
TCRBV3S1A0A5B6 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC16.38■□□□□ 0.21
TCRBV3S1A0A5B6 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
TCRBV3S1A0A5B6 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC16.38■□□□□ 0.21
TCRBV3S1A0A5B6 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TCRBV3S1A0A5B6 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TCRBV3S1A0A5B6 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TCRBV3S1A0A5B6 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TCRBV3S1A0A5B6 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TCRBV3S1A0A5B6 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TCRBV3S1A0A5B6 PKD1P1-201ENST00000458669 6805 ntBASIC16.38■□□□□ 0.21
TCRBV3S1A0A5B6 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TCRBV3S1A0A5B6 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TCRBV3S1A0A5B6 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TCRBV3S1A0A5B6 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
TCRBV3S1A0A5B6 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TCRBV3S1A0A5B6 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC16.37■□□□□ 0.21
TCRBV3S1A0A5B6 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TCRBV3S1A0A5B6 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TCRBV3S1A0A5B6 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TCRBV3S1A0A5B6 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TCRBV3S1A0A5B6 ANKRD26P3-201ENST00000454044 2748 ntBASIC16.37■□□□□ 0.21
TCRBV3S1A0A5B6 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
TCRBV3S1A0A5B6 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
TCRBV3S1A0A5B6 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
TCRBV3S1A0A5B6 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TCRBV3S1A0A5B6 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC16.37■□□□□ 0.21
TCRBV3S1A0A5B6 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
TCRBV3S1A0A5B6 HES2-202ENST00000377836 507 ntTSL 2 BASIC16.37■□□□□ 0.21
TCRBV3S1A0A5B6 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC16.37■□□□□ 0.21
TCRBV3S1A0A5B6 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC16.37■□□□□ 0.21
TCRBV3S1A0A5B6 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TCRBV3S1A0A5B6 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC16.37■□□□□ 0.21
TCRBV3S1A0A5B6 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TCRBV3S1A0A5B6 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms