Protein–RNA interactions for Protein: Q9Y5H5

PCDHA9, Protocadherin alpha-9, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9Q9Y5H5 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
PCDHA9Q9Y5H5 AC142472.1-201ENST00000612013 1741 ntBASIC23.43■■□□□ 1.34
PCDHA9Q9Y5H5 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC23.43■■□□□ 1.34
PCDHA9Q9Y5H5 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC23.43■■□□□ 1.34
PCDHA9Q9Y5H5 SNAI3-AS1-204ENST00000567997 2048 ntBASIC23.43■■□□□ 1.34
PCDHA9Q9Y5H5 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC23.43■■□□□ 1.34
PCDHA9Q9Y5H5 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
PCDHA9Q9Y5H5 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC23.42■■□□□ 1.34
PCDHA9Q9Y5H5 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
PCDHA9Q9Y5H5 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC23.42■■□□□ 1.34
PCDHA9Q9Y5H5 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC23.42■■□□□ 1.34
PCDHA9Q9Y5H5 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
PCDHA9Q9Y5H5 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
PCDHA9Q9Y5H5 CEBPA-AS1-201ENST00000592982 2198 ntBASIC23.41■■□□□ 1.34
PCDHA9Q9Y5H5 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC23.41■■□□□ 1.34
PCDHA9Q9Y5H5 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
PCDHA9Q9Y5H5 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
PCDHA9Q9Y5H5 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
PCDHA9Q9Y5H5 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
PCDHA9Q9Y5H5 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
PCDHA9Q9Y5H5 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
PCDHA9Q9Y5H5 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
PCDHA9Q9Y5H5 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
PCDHA9Q9Y5H5 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
PCDHA9Q9Y5H5 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
PCDHA9Q9Y5H5 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
PCDHA9Q9Y5H5 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC23.4■■□□□ 1.34
PCDHA9Q9Y5H5 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC23.4■■□□□ 1.34
PCDHA9Q9Y5H5 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC23.4■■□□□ 1.34
PCDHA9Q9Y5H5 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC23.39■■□□□ 1.34
PCDHA9Q9Y5H5 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
PCDHA9Q9Y5H5 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
PCDHA9Q9Y5H5 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
PCDHA9Q9Y5H5 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC23.39■■□□□ 1.33
PCDHA9Q9Y5H5 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC23.39■■□□□ 1.33
PCDHA9Q9Y5H5 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC23.39■■□□□ 1.33
PCDHA9Q9Y5H5 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
PCDHA9Q9Y5H5 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC23.39■■□□□ 1.33
PCDHA9Q9Y5H5 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
PCDHA9Q9Y5H5 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC23.38■■□□□ 1.33
PCDHA9Q9Y5H5 MIR639-201ENST00000384974 98 ntBASIC23.38■■□□□ 1.33
PCDHA9Q9Y5H5 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
PCDHA9Q9Y5H5 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC23.38■■□□□ 1.33
PCDHA9Q9Y5H5 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC23.37■■□□□ 1.33
PCDHA9Q9Y5H5 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
PCDHA9Q9Y5H5 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
PCDHA9Q9Y5H5 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC23.37■■□□□ 1.33
PCDHA9Q9Y5H5 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC23.37■■□□□ 1.33
PCDHA9Q9Y5H5 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
PCDHA9Q9Y5H5 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
PCDHA9Q9Y5H5 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
PCDHA9Q9Y5H5 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
PCDHA9Q9Y5H5 RPS2-202ENST00000526522 924 ntTSL 2 BASIC23.36■■□□□ 1.33
PCDHA9Q9Y5H5 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
PCDHA9Q9Y5H5 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC23.36■■□□□ 1.33
PCDHA9Q9Y5H5 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC23.36■■□□□ 1.33
PCDHA9Q9Y5H5 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC23.35■■□□□ 1.33
PCDHA9Q9Y5H5 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
PCDHA9Q9Y5H5 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
PCDHA9Q9Y5H5 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
PCDHA9Q9Y5H5 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC23.35■■□□□ 1.33
PCDHA9Q9Y5H5 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC23.34■■□□□ 1.33
PCDHA9Q9Y5H5 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
PCDHA9Q9Y5H5 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC23.34■■□□□ 1.33
PCDHA9Q9Y5H5 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC23.34■■□□□ 1.33
PCDHA9Q9Y5H5 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
PCDHA9Q9Y5H5 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC23.34■■□□□ 1.33
PCDHA9Q9Y5H5 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC23.33■■□□□ 1.33
PCDHA9Q9Y5H5 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
PCDHA9Q9Y5H5 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC23.33■■□□□ 1.32
PCDHA9Q9Y5H5 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC23.33■■□□□ 1.32
PCDHA9Q9Y5H5 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
PCDHA9Q9Y5H5 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC23.32■■□□□ 1.32
PCDHA9Q9Y5H5 AL359258.2-201ENST00000564063 1566 ntBASIC23.32■■□□□ 1.32
PCDHA9Q9Y5H5 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
PCDHA9Q9Y5H5 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
PCDHA9Q9Y5H5 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
PCDHA9Q9Y5H5 MED25-210ENST00000612854 801 ntTSL 5 BASIC23.32■■□□□ 1.32
PCDHA9Q9Y5H5 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
PCDHA9Q9Y5H5 MED25-214ENST00000622402 642 ntTSL 5 BASIC23.32■■□□□ 1.32
PCDHA9Q9Y5H5 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
PCDHA9Q9Y5H5 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
PCDHA9Q9Y5H5 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC23.31■■□□□ 1.32
PCDHA9Q9Y5H5 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
PCDHA9Q9Y5H5 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC23.31■■□□□ 1.32
PCDHA9Q9Y5H5 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC23.31■■□□□ 1.32
PCDHA9Q9Y5H5 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
PCDHA9Q9Y5H5 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
PCDHA9Q9Y5H5 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
PCDHA9Q9Y5H5 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
PCDHA9Q9Y5H5 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
PCDHA9Q9Y5H5 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
PCDHA9Q9Y5H5 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC23.29■■□□□ 1.32
PCDHA9Q9Y5H5 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC23.29■■□□□ 1.32
PCDHA9Q9Y5H5 ERN1-208ENST00000606895 2068 ntBASIC23.29■■□□□ 1.32
PCDHA9Q9Y5H5 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
PCDHA9Q9Y5H5 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC23.28■■□□□ 1.32
PCDHA9Q9Y5H5 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC23.28■■□□□ 1.32
PCDHA9Q9Y5H5 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
PCDHA9Q9Y5H5 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC23.28■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms