Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC23.56■■□□□ 1.36
PCDHGA11Q9Y5H2 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
PCDHGA11Q9Y5H2 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
PCDHGA11Q9Y5H2 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
PCDHGA11Q9Y5H2 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
PCDHGA11Q9Y5H2 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC23.54■■□□□ 1.36
PCDHGA11Q9Y5H2 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
PCDHGA11Q9Y5H2 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
PCDHGA11Q9Y5H2 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
PCDHGA11Q9Y5H2 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC23.53■■□□□ 1.36
PCDHGA11Q9Y5H2 AL359504.2-201ENST00000605506 1601 ntBASIC23.53■■□□□ 1.36
PCDHGA11Q9Y5H2 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
PCDHGA11Q9Y5H2 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
PCDHGA11Q9Y5H2 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
PCDHGA11Q9Y5H2 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
PCDHGA11Q9Y5H2 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
PCDHGA11Q9Y5H2 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
PCDHGA11Q9Y5H2 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
PCDHGA11Q9Y5H2 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
PCDHGA11Q9Y5H2 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC23.53■■□□□ 1.36
PCDHGA11Q9Y5H2 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
PCDHGA11Q9Y5H2 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
PCDHGA11Q9Y5H2 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC23.53■■□□□ 1.36
PCDHGA11Q9Y5H2 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
PCDHGA11Q9Y5H2 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
PCDHGA11Q9Y5H2 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC23.52■■□□□ 1.36
PCDHGA11Q9Y5H2 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC23.52■■□□□ 1.36
PCDHGA11Q9Y5H2 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC23.51■■□□□ 1.35
PCDHGA11Q9Y5H2 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC23.51■■□□□ 1.35
PCDHGA11Q9Y5H2 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
PCDHGA11Q9Y5H2 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC23.51■■□□□ 1.35
PCDHGA11Q9Y5H2 RPS2-202ENST00000526522 924 ntTSL 2 BASIC23.51■■□□□ 1.35
PCDHGA11Q9Y5H2 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC23.51■■□□□ 1.35
PCDHGA11Q9Y5H2 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
PCDHGA11Q9Y5H2 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
PCDHGA11Q9Y5H2 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
PCDHGA11Q9Y5H2 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
PCDHGA11Q9Y5H2 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC23.49■■□□□ 1.35
PCDHGA11Q9Y5H2 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC23.49■■□□□ 1.35
PCDHGA11Q9Y5H2 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC23.49■■□□□ 1.35
PCDHGA11Q9Y5H2 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
PCDHGA11Q9Y5H2 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC23.49■■□□□ 1.35
PCDHGA11Q9Y5H2 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
PCDHGA11Q9Y5H2 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC23.49■■□□□ 1.35
PCDHGA11Q9Y5H2 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
PCDHGA11Q9Y5H2 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC23.49■■□□□ 1.35
PCDHGA11Q9Y5H2 DUSP8P4-201ENST00000399538 1761 ntBASIC23.49■■□□□ 1.35
PCDHGA11Q9Y5H2 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC23.49■■□□□ 1.35
PCDHGA11Q9Y5H2 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
PCDHGA11Q9Y5H2 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC23.49■■□□□ 1.35
PCDHGA11Q9Y5H2 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC23.49■■□□□ 1.35
PCDHGA11Q9Y5H2 AC020928.2-201ENST00000588717 2197 ntBASIC23.48■■□□□ 1.35
PCDHGA11Q9Y5H2 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC23.48■■□□□ 1.35
PCDHGA11Q9Y5H2 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
PCDHGA11Q9Y5H2 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC23.48■■□□□ 1.35
PCDHGA11Q9Y5H2 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC23.48■■□□□ 1.35
PCDHGA11Q9Y5H2 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
PCDHGA11Q9Y5H2 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC23.48■■□□□ 1.35
PCDHGA11Q9Y5H2 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
PCDHGA11Q9Y5H2 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
PCDHGA11Q9Y5H2 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC23.47■■□□□ 1.35
PCDHGA11Q9Y5H2 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
PCDHGA11Q9Y5H2 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
PCDHGA11Q9Y5H2 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC23.47■■□□□ 1.35
PCDHGA11Q9Y5H2 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
PCDHGA11Q9Y5H2 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
PCDHGA11Q9Y5H2 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
PCDHGA11Q9Y5H2 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
PCDHGA11Q9Y5H2 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC23.46■■□□□ 1.35
PCDHGA11Q9Y5H2 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC23.45■■□□□ 1.35
PCDHGA11Q9Y5H2 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC23.45■■□□□ 1.34
PCDHGA11Q9Y5H2 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC23.45■■□□□ 1.34
PCDHGA11Q9Y5H2 TPT1-202ENST00000379055 948 ntTSL 2 BASIC23.44■■□□□ 1.34
PCDHGA11Q9Y5H2 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC23.44■■□□□ 1.34
PCDHGA11Q9Y5H2 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC23.44■■□□□ 1.34
PCDHGA11Q9Y5H2 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
PCDHGA11Q9Y5H2 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
PCDHGA11Q9Y5H2 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
PCDHGA11Q9Y5H2 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC23.43■■□□□ 1.34
PCDHGA11Q9Y5H2 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC23.43■■□□□ 1.34
PCDHGA11Q9Y5H2 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
PCDHGA11Q9Y5H2 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC23.43■■□□□ 1.34
PCDHGA11Q9Y5H2 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
PCDHGA11Q9Y5H2 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC23.42■■□□□ 1.34
PCDHGA11Q9Y5H2 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC23.42■■□□□ 1.34
PCDHGA11Q9Y5H2 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
PCDHGA11Q9Y5H2 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC23.42■■□□□ 1.34
PCDHGA11Q9Y5H2 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC23.41■■□□□ 1.34
PCDHGA11Q9Y5H2 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC23.41■■□□□ 1.34
PCDHGA11Q9Y5H2 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
PCDHGA11Q9Y5H2 AC060814.1-201ENST00000554326 538 ntBASIC23.41■■□□□ 1.34
PCDHGA11Q9Y5H2 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC23.41■■□□□ 1.34
PCDHGA11Q9Y5H2 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
PCDHGA11Q9Y5H2 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC23.41■■□□□ 1.34
PCDHGA11Q9Y5H2 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC23.4■■□□□ 1.34
PCDHGA11Q9Y5H2 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
PCDHGA11Q9Y5H2 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC23.4■■□□□ 1.34
PCDHGA11Q9Y5H2 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
PCDHGA11Q9Y5H2 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC23.4■■□□□ 1.34
PCDHGA11Q9Y5H2 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Retrieved 100 of 98,524 protein–RNA pairs in 149 ms