Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC21.19■□□□□ 0.98
CDH20Q9HBT6 AC007029.1-201ENST00000604183 313 ntBASIC21.19■□□□□ 0.98
CDH20Q9HBT6 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC21.19■□□□□ 0.98
CDH20Q9HBT6 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC21.19■□□□□ 0.98
CDH20Q9HBT6 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC21.19■□□□□ 0.98
CDH20Q9HBT6 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC21.19■□□□□ 0.98
CDH20Q9HBT6 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CDH20Q9HBT6 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CDH20Q9HBT6 PKM-203ENST00000389093 2279 ntTSL 5 BASIC21.18■□□□□ 0.98
CDH20Q9HBT6 AC135731.1-201ENST00000569415 2548 ntBASIC21.18■□□□□ 0.98
CDH20Q9HBT6 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC21.18■□□□□ 0.98
CDH20Q9HBT6 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CDH20Q9HBT6 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CDH20Q9HBT6 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC21.17■□□□□ 0.98
CDH20Q9HBT6 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
CDH20Q9HBT6 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CDH20Q9HBT6 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CDH20Q9HBT6 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CDH20Q9HBT6 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
CDH20Q9HBT6 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC21.17■□□□□ 0.98
CDH20Q9HBT6 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CDH20Q9HBT6 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CDH20Q9HBT6 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC21.16■□□□□ 0.98
CDH20Q9HBT6 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CDH20Q9HBT6 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
CDH20Q9HBT6 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC21.16■□□□□ 0.98
CDH20Q9HBT6 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC21.16■□□□□ 0.98
CDH20Q9HBT6 RP9P-202ENST00000450133 1212 ntBASIC21.16■□□□□ 0.98
CDH20Q9HBT6 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CDH20Q9HBT6 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CDH20Q9HBT6 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CDH20Q9HBT6 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
CDH20Q9HBT6 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CDH20Q9HBT6 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CDH20Q9HBT6 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CDH20Q9HBT6 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC21.15■□□□□ 0.98
CDH20Q9HBT6 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
CDH20Q9HBT6 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
CDH20Q9HBT6 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CDH20Q9HBT6 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC21.14■□□□□ 0.97
CDH20Q9HBT6 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CDH20Q9HBT6 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
CDH20Q9HBT6 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
CDH20Q9HBT6 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CDH20Q9HBT6 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CDH20Q9HBT6 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC21.14■□□□□ 0.97
CDH20Q9HBT6 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC21.13■□□□□ 0.97
CDH20Q9HBT6 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
CDH20Q9HBT6 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC21.13■□□□□ 0.97
CDH20Q9HBT6 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CDH20Q9HBT6 AC093536.1-201ENST00000569153 554 ntBASIC21.13■□□□□ 0.97
CDH20Q9HBT6 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
CDH20Q9HBT6 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CDH20Q9HBT6 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CDH20Q9HBT6 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
CDH20Q9HBT6 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
CDH20Q9HBT6 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
CDH20Q9HBT6 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC21.12■□□□□ 0.97
CDH20Q9HBT6 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC21.12■□□□□ 0.97
CDH20Q9HBT6 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC21.12■□□□□ 0.97
CDH20Q9HBT6 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
CDH20Q9HBT6 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CDH20Q9HBT6 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
CDH20Q9HBT6 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC21.11■□□□□ 0.97
CDH20Q9HBT6 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
CDH20Q9HBT6 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC21.11■□□□□ 0.97
CDH20Q9HBT6 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CDH20Q9HBT6 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC21.11■□□□□ 0.97
CDH20Q9HBT6 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CDH20Q9HBT6 GFER-205ENST00000569451 517 ntTSL 5 BASIC21.1■□□□□ 0.97
CDH20Q9HBT6 ABHD17AP5-201ENST00000580133 923 ntBASIC21.1■□□□□ 0.97
CDH20Q9HBT6 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC21.1■□□□□ 0.97
CDH20Q9HBT6 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC21.1■□□□□ 0.97
CDH20Q9HBT6 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC21.1■□□□□ 0.97
CDH20Q9HBT6 HYI-213ENST00000583037 1322 ntTSL 5 BASIC21.09■□□□□ 0.97
CDH20Q9HBT6 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CDH20Q9HBT6 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
CDH20Q9HBT6 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CDH20Q9HBT6 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CDH20Q9HBT6 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
CDH20Q9HBT6 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CDH20Q9HBT6 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CDH20Q9HBT6 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC21.08■□□□□ 0.96
CDH20Q9HBT6 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC21.08■□□□□ 0.96
CDH20Q9HBT6 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC21.08■□□□□ 0.96
CDH20Q9HBT6 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CDH20Q9HBT6 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC21.07■□□□□ 0.96
CDH20Q9HBT6 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CDH20Q9HBT6 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CDH20Q9HBT6 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CDH20Q9HBT6 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
CDH20Q9HBT6 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CDH20Q9HBT6 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CDH20Q9HBT6 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC21.07■□□□□ 0.96
CDH20Q9HBT6 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
CDH20Q9HBT6 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CDH20Q9HBT6 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CDH20Q9HBT6 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
CDH20Q9HBT6 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
CDH20Q9HBT6 HES4-204ENST00000484667 667 ntTSL 3 BASIC21.06■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 15.6 ms