Protein–RNA interactions for Protein: Q9H2S5

RNF39, RING finger protein 39, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39Q9H2S5 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC26.67■■□□□ 1.86
RNF39Q9H2S5 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
RNF39Q9H2S5 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC26.67■■□□□ 1.86
RNF39Q9H2S5 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC26.67■■□□□ 1.86
RNF39Q9H2S5 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC26.66■■□□□ 1.86
RNF39Q9H2S5 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
RNF39Q9H2S5 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
RNF39Q9H2S5 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC26.66■■□□□ 1.86
RNF39Q9H2S5 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC26.66■■□□□ 1.86
RNF39Q9H2S5 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC26.65■■□□□ 1.86
RNF39Q9H2S5 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
RNF39Q9H2S5 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC26.65■■□□□ 1.86
RNF39Q9H2S5 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC26.65■■□□□ 1.86
RNF39Q9H2S5 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC26.65■■□□□ 1.86
RNF39Q9H2S5 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC26.65■■□□□ 1.86
RNF39Q9H2S5 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
RNF39Q9H2S5 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC26.64■■□□□ 1.86
RNF39Q9H2S5 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC26.64■■□□□ 1.86
RNF39Q9H2S5 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC26.64■■□□□ 1.85
RNF39Q9H2S5 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC26.63■■□□□ 1.85
RNF39Q9H2S5 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC26.63■■□□□ 1.85
RNF39Q9H2S5 AC013391.2-201ENST00000559041 501 ntTSL 5 BASIC26.63■■□□□ 1.85
RNF39Q9H2S5 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
RNF39Q9H2S5 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC26.63■■□□□ 1.85
RNF39Q9H2S5 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC26.62■■□□□ 1.85
RNF39Q9H2S5 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC26.62■■□□□ 1.85
RNF39Q9H2S5 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC26.62■■□□□ 1.85
RNF39Q9H2S5 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC26.62■■□□□ 1.85
RNF39Q9H2S5 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
RNF39Q9H2S5 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
RNF39Q9H2S5 BX255925.1-201ENST00000566954 1854 ntBASIC26.62■■□□□ 1.85
RNF39Q9H2S5 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
RNF39Q9H2S5 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
RNF39Q9H2S5 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC26.61■■□□□ 1.85
RNF39Q9H2S5 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
RNF39Q9H2S5 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC26.6■■□□□ 1.85
RNF39Q9H2S5 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
RNF39Q9H2S5 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC26.6■■□□□ 1.85
RNF39Q9H2S5 MTND2P7-201ENST00000521337 640 ntBASIC26.6■■□□□ 1.85
RNF39Q9H2S5 AL589935.2-201ENST00000616471 1231 ntBASIC26.6■■□□□ 1.85
RNF39Q9H2S5 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC26.6■■□□□ 1.85
RNF39Q9H2S5 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC26.6■■□□□ 1.85
RNF39Q9H2S5 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC26.6■■□□□ 1.85
RNF39Q9H2S5 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC26.59■■□□□ 1.85
RNF39Q9H2S5 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
RNF39Q9H2S5 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC26.59■■□□□ 1.85
RNF39Q9H2S5 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC26.59■■□□□ 1.85
RNF39Q9H2S5 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC26.59■■□□□ 1.85
RNF39Q9H2S5 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC26.59■■□□□ 1.85
RNF39Q9H2S5 RARRES2P1-201ENST00000474487 481 ntBASIC26.58■■□□□ 1.85
RNF39Q9H2S5 PAX6-247ENST00000638965 979 ntTSL 5 BASIC26.58■■□□□ 1.85
RNF39Q9H2S5 AC142086.6-201ENST00000621154 1765 ntBASIC26.57■■□□□ 1.84
RNF39Q9H2S5 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
RNF39Q9H2S5 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
RNF39Q9H2S5 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC26.56■■□□□ 1.84
RNF39Q9H2S5 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
RNF39Q9H2S5 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC26.55■■□□□ 1.84
RNF39Q9H2S5 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
RNF39Q9H2S5 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC26.55■■□□□ 1.84
RNF39Q9H2S5 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC26.55■■□□□ 1.84
RNF39Q9H2S5 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC26.55■■□□□ 1.84
RNF39Q9H2S5 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
RNF39Q9H2S5 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC26.55■■□□□ 1.84
RNF39Q9H2S5 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
RNF39Q9H2S5 RN7SL718P-201ENST00000581254 303 ntBASIC26.54■■□□□ 1.84
RNF39Q9H2S5 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC26.53■■□□□ 1.84
RNF39Q9H2S5 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
RNF39Q9H2S5 MIR6765-201ENST00000614092 87 ntBASIC26.53■■□□□ 1.84
RNF39Q9H2S5 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC26.53■■□□□ 1.84
RNF39Q9H2S5 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC26.53■■□□□ 1.84
RNF39Q9H2S5 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
RNF39Q9H2S5 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC26.52■■□□□ 1.84
RNF39Q9H2S5 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC26.52■■□□□ 1.84
RNF39Q9H2S5 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
RNF39Q9H2S5 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
RNF39Q9H2S5 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC26.52■■□□□ 1.84
RNF39Q9H2S5 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC26.52■■□□□ 1.84
RNF39Q9H2S5 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
RNF39Q9H2S5 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC26.52■■□□□ 1.84
RNF39Q9H2S5 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC26.51■■□□□ 1.84
RNF39Q9H2S5 AC108359.1-201ENST00000616451 1211 ntBASIC26.51■■□□□ 1.83
RNF39Q9H2S5 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC26.51■■□□□ 1.83
RNF39Q9H2S5 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC26.5■■□□□ 1.83
RNF39Q9H2S5 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC26.5■■□□□ 1.83
RNF39Q9H2S5 AC010980.1-201ENST00000587192 1142 ntBASIC26.5■■□□□ 1.83
RNF39Q9H2S5 AC018755.3-202ENST00000596210 929 ntBASIC26.5■■□□□ 1.83
RNF39Q9H2S5 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC26.5■■□□□ 1.83
RNF39Q9H2S5 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
RNF39Q9H2S5 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
RNF39Q9H2S5 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
RNF39Q9H2S5 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC26.49■■□□□ 1.83
RNF39Q9H2S5 AC073575.1-201ENST00000551125 596 ntTSL 3 BASIC26.49■■□□□ 1.83
RNF39Q9H2S5 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC26.49■■□□□ 1.83
RNF39Q9H2S5 BHLHE23-202ENST00000612929 1109 ntBASIC26.49■■□□□ 1.83
RNF39Q9H2S5 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
RNF39Q9H2S5 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
RNF39Q9H2S5 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC26.48■■□□□ 1.83
RNF39Q9H2S5 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
RNF39Q9H2S5 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC26.47■■□□□ 1.83
RNF39Q9H2S5 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Retrieved 100 of 98,524 protein–RNA pairs in 13.7 ms