Protein–RNA interactions for Protein: Q9H2H0

CXXC4, CXXC-type zinc finger protein 4, humanhuman

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC4Q9H2H0 OR2A1-AS1-204ENST00000470435 602 ntBASIC21.3■■□□□ 1
CXXC4Q9H2H0 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC21.3■■□□□ 1
CXXC4Q9H2H0 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
CXXC4Q9H2H0 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC21.29■■□□□ 1
CXXC4Q9H2H0 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
CXXC4Q9H2H0 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
CXXC4Q9H2H0 KRT8P33-201ENST00000508125 1423 ntBASIC21.29■■□□□ 1
CXXC4Q9H2H0 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CXXC4Q9H2H0 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC21.28■■□□□ 1
CXXC4Q9H2H0 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
CXXC4Q9H2H0 YBX1P4-201ENST00000392794 808 ntBASIC21.28■■□□□ 1
CXXC4Q9H2H0 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC21.28■■□□□ 1
CXXC4Q9H2H0 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
CXXC4Q9H2H0 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC21.28■■□□□ 1
CXXC4Q9H2H0 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CXXC4Q9H2H0 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC21.28■■□□□ 1
CXXC4Q9H2H0 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC21.28■■□□□ 1
CXXC4Q9H2H0 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CXXC4Q9H2H0 MIR935-201ENST00000401179 91 ntBASIC21.27■■□□□ 1
CXXC4Q9H2H0 AC103834.1-201ENST00000520383 144 ntBASIC21.27■■□□□ 1
CXXC4Q9H2H0 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC21.27■■□□□ 1
CXXC4Q9H2H0 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CXXC4Q9H2H0 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC21.26■□□□□ 0.99
CXXC4Q9H2H0 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC21.26■□□□□ 0.99
CXXC4Q9H2H0 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC21.26■□□□□ 0.99
CXXC4Q9H2H0 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC21.26■□□□□ 0.99
CXXC4Q9H2H0 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CXXC4Q9H2H0 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CXXC4Q9H2H0 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC21.25■□□□□ 0.99
CXXC4Q9H2H0 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
CXXC4Q9H2H0 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC21.25■□□□□ 0.99
CXXC4Q9H2H0 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
CXXC4Q9H2H0 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CXXC4Q9H2H0 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC21.24■□□□□ 0.99
CXXC4Q9H2H0 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
CXXC4Q9H2H0 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CXXC4Q9H2H0 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
CXXC4Q9H2H0 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
CXXC4Q9H2H0 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CXXC4Q9H2H0 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC21.23■□□□□ 0.99
CXXC4Q9H2H0 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC21.23■□□□□ 0.99
CXXC4Q9H2H0 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CXXC4Q9H2H0 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC21.23■□□□□ 0.99
CXXC4Q9H2H0 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
CXXC4Q9H2H0 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
CXXC4Q9H2H0 BEX3-202ENST00000372634 753 ntTSL 2 BASIC21.22■□□□□ 0.99
CXXC4Q9H2H0 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CXXC4Q9H2H0 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
CXXC4Q9H2H0 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CXXC4Q9H2H0 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
CXXC4Q9H2H0 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
CXXC4Q9H2H0 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CXXC4Q9H2H0 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
CXXC4Q9H2H0 AC025884.2-201ENST00000553429 711 ntBASIC21.21■□□□□ 0.99
CXXC4Q9H2H0 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CXXC4Q9H2H0 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
CXXC4Q9H2H0 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CXXC4Q9H2H0 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
CXXC4Q9H2H0 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CXXC4Q9H2H0 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CXXC4Q9H2H0 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
CXXC4Q9H2H0 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
CXXC4Q9H2H0 AL356441.2-201ENST00000443009 864 ntBASIC21.2■□□□□ 0.98
CXXC4Q9H2H0 AC139795.1-202ENST00000500444 432 ntBASIC21.2■□□□□ 0.98
CXXC4Q9H2H0 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
CXXC4Q9H2H0 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC21.2■□□□□ 0.98
CXXC4Q9H2H0 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CXXC4Q9H2H0 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC21.19■□□□□ 0.98
CXXC4Q9H2H0 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CXXC4Q9H2H0 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
CXXC4Q9H2H0 SPCS2P3-201ENST00000500401 656 ntBASIC21.19■□□□□ 0.98
CXXC4Q9H2H0 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
CXXC4Q9H2H0 MIR4508-201ENST00000584178 70 ntBASIC21.19■□□□□ 0.98
CXXC4Q9H2H0 RAP2CP1-202ENST00000605179 643 ntBASIC21.19■□□□□ 0.98
CXXC4Q9H2H0 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
CXXC4Q9H2H0 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CXXC4Q9H2H0 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC21.18■□□□□ 0.98
CXXC4Q9H2H0 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
CXXC4Q9H2H0 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC21.18■□□□□ 0.98
CXXC4Q9H2H0 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CXXC4Q9H2H0 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC21.18■□□□□ 0.98
CXXC4Q9H2H0 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CXXC4Q9H2H0 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC21.18■□□□□ 0.98
CXXC4Q9H2H0 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CXXC4Q9H2H0 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CXXC4Q9H2H0 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CXXC4Q9H2H0 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
CXXC4Q9H2H0 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
CXXC4Q9H2H0 HYI-210ENST00000486909 905 ntTSL 5 BASIC21.17■□□□□ 0.98
CXXC4Q9H2H0 MIR6765-201ENST00000614092 87 ntBASIC21.17■□□□□ 0.98
CXXC4Q9H2H0 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC21.17■□□□□ 0.98
CXXC4Q9H2H0 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC21.17■□□□□ 0.98
CXXC4Q9H2H0 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CXXC4Q9H2H0 WHAMMP3-201ENST00000611636 1609 ntBASIC21.16■□□□□ 0.98
CXXC4Q9H2H0 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC21.16■□□□□ 0.98
CXXC4Q9H2H0 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC21.16■□□□□ 0.98
CXXC4Q9H2H0 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CXXC4Q9H2H0 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CXXC4Q9H2H0 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CXXC4Q9H2H0 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms