Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC12.36□□□□□ -0.43
KRTAP3-1Q9BYR8 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
KRTAP3-1Q9BYR8 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
KRTAP3-1Q9BYR8 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC12.36□□□□□ -0.43
KRTAP3-1Q9BYR8 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
KRTAP3-1Q9BYR8 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
KRTAP3-1Q9BYR8 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC12.35□□□□□ -0.43
KRTAP3-1Q9BYR8 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
KRTAP3-1Q9BYR8 AC096887.2-201ENST00000623443 1957 ntBASIC12.35□□□□□ -0.43
KRTAP3-1Q9BYR8 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
KRTAP3-1Q9BYR8 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC12.35□□□□□ -0.43
KRTAP3-1Q9BYR8 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
KRTAP3-1Q9BYR8 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC12.35□□□□□ -0.43
KRTAP3-1Q9BYR8 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC12.35□□□□□ -0.43
KRTAP3-1Q9BYR8 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC12.35□□□□□ -0.43
KRTAP3-1Q9BYR8 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
KRTAP3-1Q9BYR8 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
KRTAP3-1Q9BYR8 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC12.34□□□□□ -0.43
KRTAP3-1Q9BYR8 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
KRTAP3-1Q9BYR8 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
KRTAP3-1Q9BYR8 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
KRTAP3-1Q9BYR8 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
KRTAP3-1Q9BYR8 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
KRTAP3-1Q9BYR8 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
KRTAP3-1Q9BYR8 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
KRTAP3-1Q9BYR8 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC12.34□□□□□ -0.43
KRTAP3-1Q9BYR8 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
KRTAP3-1Q9BYR8 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
KRTAP3-1Q9BYR8 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC12.33□□□□□ -0.44
KRTAP3-1Q9BYR8 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
KRTAP3-1Q9BYR8 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
KRTAP3-1Q9BYR8 RPS2-210ENST00000530225 765 ntTSL 2 BASIC12.33□□□□□ -0.44
KRTAP3-1Q9BYR8 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
KRTAP3-1Q9BYR8 RARA-203ENST00000394086 2008 ntTSL 2 BASIC12.33□□□□□ -0.44
KRTAP3-1Q9BYR8 AC087741.3-201ENST00000624270 1347 ntBASIC12.33□□□□□ -0.44
KRTAP3-1Q9BYR8 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
KRTAP3-1Q9BYR8 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
KRTAP3-1Q9BYR8 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
KRTAP3-1Q9BYR8 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
KRTAP3-1Q9BYR8 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
KRTAP3-1Q9BYR8 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC12.32□□□□□ -0.44
KRTAP3-1Q9BYR8 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
KRTAP3-1Q9BYR8 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
KRTAP3-1Q9BYR8 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
KRTAP3-1Q9BYR8 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
KRTAP3-1Q9BYR8 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC12.32□□□□□ -0.44
KRTAP3-1Q9BYR8 NRG1-221ENST00000614767 762 ntTSL 5 BASIC12.32□□□□□ -0.44
KRTAP3-1Q9BYR8 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
KRTAP3-1Q9BYR8 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
KRTAP3-1Q9BYR8 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
KRTAP3-1Q9BYR8 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC12.32□□□□□ -0.44
KRTAP3-1Q9BYR8 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
KRTAP3-1Q9BYR8 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
KRTAP3-1Q9BYR8 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC12.31□□□□□ -0.44
KRTAP3-1Q9BYR8 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
KRTAP3-1Q9BYR8 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC12.31□□□□□ -0.44
KRTAP3-1Q9BYR8 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC12.31□□□□□ -0.44
KRTAP3-1Q9BYR8 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC12.31□□□□□ -0.44
KRTAP3-1Q9BYR8 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
KRTAP3-1Q9BYR8 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
KRTAP3-1Q9BYR8 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
KRTAP3-1Q9BYR8 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
KRTAP3-1Q9BYR8 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
KRTAP3-1Q9BYR8 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC12.3□□□□□ -0.44
KRTAP3-1Q9BYR8 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
KRTAP3-1Q9BYR8 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
KRTAP3-1Q9BYR8 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC12.3□□□□□ -0.44
KRTAP3-1Q9BYR8 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
KRTAP3-1Q9BYR8 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC12.3□□□□□ -0.44
KRTAP3-1Q9BYR8 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
KRTAP3-1Q9BYR8 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
KRTAP3-1Q9BYR8 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
KRTAP3-1Q9BYR8 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC12.3□□□□□ -0.44
KRTAP3-1Q9BYR8 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
KRTAP3-1Q9BYR8 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
KRTAP3-1Q9BYR8 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
KRTAP3-1Q9BYR8 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
KRTAP3-1Q9BYR8 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
KRTAP3-1Q9BYR8 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC12.29□□□□□ -0.44
KRTAP3-1Q9BYR8 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
KRTAP3-1Q9BYR8 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
KRTAP3-1Q9BYR8 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC12.29□□□□□ -0.44
KRTAP3-1Q9BYR8 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
KRTAP3-1Q9BYR8 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC12.29□□□□□ -0.44
KRTAP3-1Q9BYR8 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
KRTAP3-1Q9BYR8 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
KRTAP3-1Q9BYR8 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
KRTAP3-1Q9BYR8 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
KRTAP3-1Q9BYR8 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC12.28□□□□□ -0.44
KRTAP3-1Q9BYR8 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC12.28□□□□□ -0.44
KRTAP3-1Q9BYR8 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
KRTAP3-1Q9BYR8 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
KRTAP3-1Q9BYR8 AP006261.1-201ENST00000584783 668 ntBASIC12.28□□□□□ -0.44
KRTAP3-1Q9BYR8 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
KRTAP3-1Q9BYR8 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC12.28□□□□□ -0.44
KRTAP3-1Q9BYR8 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
KRTAP3-1Q9BYR8 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC12.27□□□□□ -0.44
KRTAP3-1Q9BYR8 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
KRTAP3-1Q9BYR8 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
KRTAP3-1Q9BYR8 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC12.27□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms