Protein–RNA interactions for Protein: Q96TA0

PCDHB18P, Putative protocadherin beta-18, humanhuman

Predictions only

Length 734 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB18PQ96TA0 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
PCDHB18PQ96TA0 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
PCDHB18PQ96TA0 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC25.94■■□□□ 1.74
PCDHB18PQ96TA0 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC25.94■■□□□ 1.74
PCDHB18PQ96TA0 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
PCDHB18PQ96TA0 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC25.94■■□□□ 1.74
PCDHB18PQ96TA0 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC25.94■■□□□ 1.74
PCDHB18PQ96TA0 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC25.93■■□□□ 1.74
PCDHB18PQ96TA0 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC25.93■■□□□ 1.74
PCDHB18PQ96TA0 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
PCDHB18PQ96TA0 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC25.93■■□□□ 1.74
PCDHB18PQ96TA0 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
PCDHB18PQ96TA0 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC25.92■■□□□ 1.74
PCDHB18PQ96TA0 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC25.92■■□□□ 1.74
PCDHB18PQ96TA0 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC25.92■■□□□ 1.74
PCDHB18PQ96TA0 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC25.92■■□□□ 1.74
PCDHB18PQ96TA0 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
PCDHB18PQ96TA0 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
PCDHB18PQ96TA0 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC25.91■■□□□ 1.74
PCDHB18PQ96TA0 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
PCDHB18PQ96TA0 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC25.91■■□□□ 1.74
PCDHB18PQ96TA0 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC25.91■■□□□ 1.74
PCDHB18PQ96TA0 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
PCDHB18PQ96TA0 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
PCDHB18PQ96TA0 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
PCDHB18PQ96TA0 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
PCDHB18PQ96TA0 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
PCDHB18PQ96TA0 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
PCDHB18PQ96TA0 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC25.89■■□□□ 1.74
PCDHB18PQ96TA0 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
PCDHB18PQ96TA0 AC020928.2-201ENST00000588717 2197 ntBASIC25.89■■□□□ 1.74
PCDHB18PQ96TA0 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
PCDHB18PQ96TA0 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC25.89■■□□□ 1.74
PCDHB18PQ96TA0 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC25.89■■□□□ 1.73
PCDHB18PQ96TA0 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
PCDHB18PQ96TA0 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC25.88■■□□□ 1.73
PCDHB18PQ96TA0 AC010501.1-201ENST00000606270 1962 ntBASIC25.88■■□□□ 1.73
PCDHB18PQ96TA0 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
PCDHB18PQ96TA0 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC25.88■■□□□ 1.73
PCDHB18PQ96TA0 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
PCDHB18PQ96TA0 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
PCDHB18PQ96TA0 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC25.88■■□□□ 1.73
PCDHB18PQ96TA0 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
PCDHB18PQ96TA0 AC126177.7-201ENST00000547904 679 ntBASIC25.88■■□□□ 1.73
PCDHB18PQ96TA0 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
PCDHB18PQ96TA0 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
PCDHB18PQ96TA0 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC25.88■■□□□ 1.73
PCDHB18PQ96TA0 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC25.88■■□□□ 1.73
PCDHB18PQ96TA0 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC25.88■■□□□ 1.73
PCDHB18PQ96TA0 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
PCDHB18PQ96TA0 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC25.87■■□□□ 1.73
PCDHB18PQ96TA0 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
PCDHB18PQ96TA0 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC25.87■■□□□ 1.73
PCDHB18PQ96TA0 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
PCDHB18PQ96TA0 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC25.86■■□□□ 1.73
PCDHB18PQ96TA0 AL157400.5-201ENST00000507624 621 ntBASIC25.86■■□□□ 1.73
PCDHB18PQ96TA0 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC25.86■■□□□ 1.73
PCDHB18PQ96TA0 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC25.85■■□□□ 1.73
PCDHB18PQ96TA0 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
PCDHB18PQ96TA0 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC25.85■■□□□ 1.73
PCDHB18PQ96TA0 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
PCDHB18PQ96TA0 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
PCDHB18PQ96TA0 AC060814.1-201ENST00000554326 538 ntBASIC25.84■■□□□ 1.73
PCDHB18PQ96TA0 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC25.84■■□□□ 1.73
PCDHB18PQ96TA0 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
PCDHB18PQ96TA0 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
PCDHB18PQ96TA0 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
PCDHB18PQ96TA0 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC25.83■■□□□ 1.72
PCDHB18PQ96TA0 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC25.82■■□□□ 1.72
PCDHB18PQ96TA0 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC25.82■■□□□ 1.72
PCDHB18PQ96TA0 MOB2-207ENST00000614710 705 ntTSL 5 BASIC25.82■■□□□ 1.72
PCDHB18PQ96TA0 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC25.82■■□□□ 1.72
PCDHB18PQ96TA0 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
PCDHB18PQ96TA0 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
PCDHB18PQ96TA0 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
PCDHB18PQ96TA0 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
PCDHB18PQ96TA0 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
PCDHB18PQ96TA0 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC25.81■■□□□ 1.72
PCDHB18PQ96TA0 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC25.81■■□□□ 1.72
PCDHB18PQ96TA0 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC25.81■■□□□ 1.72
PCDHB18PQ96TA0 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
PCDHB18PQ96TA0 SRP68-213ENST00000629930 165 ntTSL 5 BASIC25.81■■□□□ 1.72
PCDHB18PQ96TA0 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC25.81■■□□□ 1.72
PCDHB18PQ96TA0 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
PCDHB18PQ96TA0 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
PCDHB18PQ96TA0 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC25.8■■□□□ 1.72
PCDHB18PQ96TA0 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC25.8■■□□□ 1.72
PCDHB18PQ96TA0 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
PCDHB18PQ96TA0 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC25.8■■□□□ 1.72
PCDHB18PQ96TA0 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
PCDHB18PQ96TA0 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
PCDHB18PQ96TA0 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC25.8■■□□□ 1.72
PCDHB18PQ96TA0 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
PCDHB18PQ96TA0 AC096887.2-201ENST00000623443 1957 ntBASIC25.79■■□□□ 1.72
PCDHB18PQ96TA0 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
PCDHB18PQ96TA0 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
PCDHB18PQ96TA0 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
PCDHB18PQ96TA0 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC25.79■■□□□ 1.72
PCDHB18PQ96TA0 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC25.78■■□□□ 1.72
PCDHB18PQ96TA0 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
Retrieved 100 of 98,524 protein–RNA pairs in 13.7 ms