Protein–RNA interactions for Protein: Q96FV0

LRRC46, Leucine-rich repeat-containing protein 46, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC46Q96FV0 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
LRRC46Q96FV0 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
LRRC46Q96FV0 DUX4L9-201ENST00000449051 1259 ntBASIC21.73■■□□□ 1.07
LRRC46Q96FV0 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC21.73■■□□□ 1.07
LRRC46Q96FV0 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
LRRC46Q96FV0 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
LRRC46Q96FV0 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC21.72■■□□□ 1.07
LRRC46Q96FV0 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC21.72■■□□□ 1.07
LRRC46Q96FV0 RAP2CP1-202ENST00000605179 643 ntBASIC21.72■■□□□ 1.07
LRRC46Q96FV0 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
LRRC46Q96FV0 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
LRRC46Q96FV0 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
LRRC46Q96FV0 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC21.71■■□□□ 1.07
LRRC46Q96FV0 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC21.71■■□□□ 1.07
LRRC46Q96FV0 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
LRRC46Q96FV0 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
LRRC46Q96FV0 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
LRRC46Q96FV0 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC21.71■■□□□ 1.07
LRRC46Q96FV0 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC21.71■■□□□ 1.07
LRRC46Q96FV0 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
LRRC46Q96FV0 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
LRRC46Q96FV0 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.71■■□□□ 1.07
LRRC46Q96FV0 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC21.7■■□□□ 1.06
LRRC46Q96FV0 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
LRRC46Q96FV0 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC21.7■■□□□ 1.06
LRRC46Q96FV0 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
LRRC46Q96FV0 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
LRRC46Q96FV0 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
LRRC46Q96FV0 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
LRRC46Q96FV0 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
LRRC46Q96FV0 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC21.69■■□□□ 1.06
LRRC46Q96FV0 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC21.69■■□□□ 1.06
LRRC46Q96FV0 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
LRRC46Q96FV0 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
LRRC46Q96FV0 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
LRRC46Q96FV0 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
LRRC46Q96FV0 YBX1P4-201ENST00000392794 808 ntBASIC21.68■■□□□ 1.06
LRRC46Q96FV0 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC21.68■■□□□ 1.06
LRRC46Q96FV0 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC21.68■■□□□ 1.06
LRRC46Q96FV0 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
LRRC46Q96FV0 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
LRRC46Q96FV0 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
LRRC46Q96FV0 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
LRRC46Q96FV0 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
LRRC46Q96FV0 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
LRRC46Q96FV0 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
LRRC46Q96FV0 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
LRRC46Q96FV0 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
LRRC46Q96FV0 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
LRRC46Q96FV0 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC21.67■■□□□ 1.06
LRRC46Q96FV0 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
LRRC46Q96FV0 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC21.66■■□□□ 1.06
LRRC46Q96FV0 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC21.66■■□□□ 1.06
LRRC46Q96FV0 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC21.66■■□□□ 1.06
LRRC46Q96FV0 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
LRRC46Q96FV0 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC21.66■■□□□ 1.06
LRRC46Q96FV0 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC21.66■■□□□ 1.06
LRRC46Q96FV0 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
LRRC46Q96FV0 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC21.66■■□□□ 1.06
LRRC46Q96FV0 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
LRRC46Q96FV0 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
LRRC46Q96FV0 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC21.66■■□□□ 1.06
LRRC46Q96FV0 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
LRRC46Q96FV0 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
LRRC46Q96FV0 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC21.65■■□□□ 1.06
LRRC46Q96FV0 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
LRRC46Q96FV0 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
LRRC46Q96FV0 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC21.64■■□□□ 1.06
LRRC46Q96FV0 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC21.64■■□□□ 1.06
LRRC46Q96FV0 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
LRRC46Q96FV0 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
LRRC46Q96FV0 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC21.64■■□□□ 1.05
LRRC46Q96FV0 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
LRRC46Q96FV0 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC21.64■■□□□ 1.05
LRRC46Q96FV0 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
LRRC46Q96FV0 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
LRRC46Q96FV0 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC21.63■■□□□ 1.05
LRRC46Q96FV0 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
LRRC46Q96FV0 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
LRRC46Q96FV0 AL121749.1-202ENST00000609313 2153 ntBASIC21.63■■□□□ 1.05
LRRC46Q96FV0 SNAI3-AS1-204ENST00000567997 2048 ntBASIC21.63■■□□□ 1.05
LRRC46Q96FV0 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
LRRC46Q96FV0 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC21.62■■□□□ 1.05
LRRC46Q96FV0 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
LRRC46Q96FV0 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
LRRC46Q96FV0 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC21.62■■□□□ 1.05
LRRC46Q96FV0 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
LRRC46Q96FV0 AL035685.1-201ENST00000636663 812 ntBASIC21.62■■□□□ 1.05
LRRC46Q96FV0 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
LRRC46Q96FV0 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
LRRC46Q96FV0 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
LRRC46Q96FV0 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
LRRC46Q96FV0 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
LRRC46Q96FV0 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
LRRC46Q96FV0 AC010980.1-201ENST00000587192 1142 ntBASIC21.61■■□□□ 1.05
LRRC46Q96FV0 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
LRRC46Q96FV0 TRIR-205ENST00000592273 783 ntTSL 3 BASIC21.6■■□□□ 1.05
LRRC46Q96FV0 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
LRRC46Q96FV0 WHAMMP3-201ENST00000611636 1609 ntBASIC21.59■■□□□ 1.05
LRRC46Q96FV0 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms