Protein–RNA interactions for Protein: Q96D70

R3HDM4, R3H domain-containing protein 4, humanhuman

Predictions only

Length 268 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4Q96D70 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
R3HDM4Q96D70 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
R3HDM4Q96D70 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
R3HDM4Q96D70 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
R3HDM4Q96D70 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
R3HDM4Q96D70 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC19.97■□□□□ 0.79
R3HDM4Q96D70 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC19.97■□□□□ 0.79
R3HDM4Q96D70 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
R3HDM4Q96D70 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
R3HDM4Q96D70 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
R3HDM4Q96D70 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC19.96■□□□□ 0.79
R3HDM4Q96D70 RARRES2P2-201ENST00000394842 485 ntBASIC19.96■□□□□ 0.79
R3HDM4Q96D70 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
R3HDM4Q96D70 CEP120-209ENST00000515110 606 ntTSL 3 BASIC19.96■□□□□ 0.79
R3HDM4Q96D70 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
R3HDM4Q96D70 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
R3HDM4Q96D70 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
R3HDM4Q96D70 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC19.96■□□□□ 0.79
R3HDM4Q96D70 AC020928.2-201ENST00000588717 2197 ntBASIC19.95■□□□□ 0.78
R3HDM4Q96D70 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC19.95■□□□□ 0.78
R3HDM4Q96D70 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC19.95■□□□□ 0.78
R3HDM4Q96D70 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
R3HDM4Q96D70 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
R3HDM4Q96D70 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
R3HDM4Q96D70 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
R3HDM4Q96D70 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
R3HDM4Q96D70 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
R3HDM4Q96D70 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
R3HDM4Q96D70 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
R3HDM4Q96D70 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
R3HDM4Q96D70 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
R3HDM4Q96D70 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
R3HDM4Q96D70 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC19.94■□□□□ 0.78
R3HDM4Q96D70 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
R3HDM4Q96D70 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
R3HDM4Q96D70 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC19.93■□□□□ 0.78
R3HDM4Q96D70 RPS2-210ENST00000530225 765 ntTSL 2 BASIC19.93■□□□□ 0.78
R3HDM4Q96D70 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC19.93■□□□□ 0.78
R3HDM4Q96D70 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC19.93■□□□□ 0.78
R3HDM4Q96D70 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
R3HDM4Q96D70 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
R3HDM4Q96D70 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
R3HDM4Q96D70 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
R3HDM4Q96D70 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
R3HDM4Q96D70 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
R3HDM4Q96D70 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
R3HDM4Q96D70 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC19.92■□□□□ 0.78
R3HDM4Q96D70 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
R3HDM4Q96D70 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
R3HDM4Q96D70 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
R3HDM4Q96D70 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC19.92■□□□□ 0.78
R3HDM4Q96D70 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC19.92■□□□□ 0.78
R3HDM4Q96D70 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
R3HDM4Q96D70 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
R3HDM4Q96D70 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
R3HDM4Q96D70 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
R3HDM4Q96D70 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
R3HDM4Q96D70 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
R3HDM4Q96D70 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
R3HDM4Q96D70 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC19.91■□□□□ 0.78
R3HDM4Q96D70 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
R3HDM4Q96D70 ABHD17AP5-201ENST00000580133 923 ntBASIC19.91■□□□□ 0.78
R3HDM4Q96D70 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
R3HDM4Q96D70 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC19.91■□□□□ 0.78
R3HDM4Q96D70 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
R3HDM4Q96D70 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
R3HDM4Q96D70 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
R3HDM4Q96D70 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
R3HDM4Q96D70 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC19.9■□□□□ 0.78
R3HDM4Q96D70 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
R3HDM4Q96D70 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
R3HDM4Q96D70 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
R3HDM4Q96D70 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
R3HDM4Q96D70 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
R3HDM4Q96D70 RNF126P1-201ENST00000567452 1320 ntBASIC19.89■□□□□ 0.77
R3HDM4Q96D70 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
R3HDM4Q96D70 LTK-203ENST00000453182 2412 ntTSL 2 BASIC19.88■□□□□ 0.77
R3HDM4Q96D70 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
R3HDM4Q96D70 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
R3HDM4Q96D70 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
R3HDM4Q96D70 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
R3HDM4Q96D70 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
R3HDM4Q96D70 AC008813.1-201ENST00000536597 885 ntBASIC19.88■□□□□ 0.77
R3HDM4Q96D70 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
R3HDM4Q96D70 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
R3HDM4Q96D70 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC19.88■□□□□ 0.77
R3HDM4Q96D70 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
R3HDM4Q96D70 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
R3HDM4Q96D70 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
R3HDM4Q96D70 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC19.87■□□□□ 0.77
R3HDM4Q96D70 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC19.87■□□□□ 0.77
R3HDM4Q96D70 AC022413.1-201ENST00000624602 984 ntBASIC19.87■□□□□ 0.77
R3HDM4Q96D70 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
R3HDM4Q96D70 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
R3HDM4Q96D70 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
R3HDM4Q96D70 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
R3HDM4Q96D70 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
R3HDM4Q96D70 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
R3HDM4Q96D70 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
R3HDM4Q96D70 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 14.5 ms