Protein–RNA interactions for Protein: Q93050

ATP6V0A1, V-type proton ATPase 116 kDa subunit a isoform 1, humanhuman

Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1Q93050 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
ATP6V0A1Q93050 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC27.44■■□□□ 1.98
ATP6V0A1Q93050 SPCS2P3-201ENST00000500401 656 ntBASIC27.44■■□□□ 1.98
ATP6V0A1Q93050 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC27.44■■□□□ 1.98
ATP6V0A1Q93050 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC27.44■■□□□ 1.98
ATP6V0A1Q93050 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
ATP6V0A1Q93050 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
ATP6V0A1Q93050 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
ATP6V0A1Q93050 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC27.43■■□□□ 1.98
ATP6V0A1Q93050 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC27.42■■□□□ 1.98
ATP6V0A1Q93050 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC27.42■■□□□ 1.98
ATP6V0A1Q93050 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC27.42■■□□□ 1.98
ATP6V0A1Q93050 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
ATP6V0A1Q93050 BHLHE23-202ENST00000612929 1109 ntBASIC27.41■■□□□ 1.98
ATP6V0A1Q93050 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
ATP6V0A1Q93050 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC27.4■■□□□ 1.98
ATP6V0A1Q93050 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC27.4■■□□□ 1.98
ATP6V0A1Q93050 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC27.4■■□□□ 1.98
ATP6V0A1Q93050 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC27.4■■□□□ 1.98
ATP6V0A1Q93050 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC27.4■■□□□ 1.98
ATP6V0A1Q93050 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC27.39■■□□□ 1.98
ATP6V0A1Q93050 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC27.39■■□□□ 1.98
ATP6V0A1Q93050 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC27.39■■□□□ 1.98
ATP6V0A1Q93050 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC27.39■■□□□ 1.98
ATP6V0A1Q93050 AC142472.1-201ENST00000612013 1741 ntBASIC27.38■■□□□ 1.97
ATP6V0A1Q93050 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
ATP6V0A1Q93050 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC27.38■■□□□ 1.97
ATP6V0A1Q93050 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC27.38■■□□□ 1.97
ATP6V0A1Q93050 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC27.38■■□□□ 1.97
ATP6V0A1Q93050 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC27.38■■□□□ 1.97
ATP6V0A1Q93050 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
ATP6V0A1Q93050 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
ATP6V0A1Q93050 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
ATP6V0A1Q93050 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC27.37■■□□□ 1.97
ATP6V0A1Q93050 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC27.37■■□□□ 1.97
ATP6V0A1Q93050 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
ATP6V0A1Q93050 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC27.36■■□□□ 1.97
ATP6V0A1Q93050 MIR6765-201ENST00000614092 87 ntBASIC27.36■■□□□ 1.97
ATP6V0A1Q93050 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC27.35■■□□□ 1.97
ATP6V0A1Q93050 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
ATP6V0A1Q93050 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC27.35■■□□□ 1.97
ATP6V0A1Q93050 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
ATP6V0A1Q93050 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
ATP6V0A1Q93050 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
ATP6V0A1Q93050 AC010980.1-201ENST00000587192 1142 ntBASIC27.34■■□□□ 1.97
ATP6V0A1Q93050 AP004609.3-201ENST00000610705 1884 ntBASIC27.34■■□□□ 1.97
ATP6V0A1Q93050 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
ATP6V0A1Q93050 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
ATP6V0A1Q93050 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC27.33■■□□□ 1.96
ATP6V0A1Q93050 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC27.32■■□□□ 1.96
ATP6V0A1Q93050 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC27.32■■□□□ 1.96
ATP6V0A1Q93050 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC27.32■■□□□ 1.96
ATP6V0A1Q93050 AC018755.3-202ENST00000596210 929 ntBASIC27.32■■□□□ 1.96
ATP6V0A1Q93050 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC27.32■■□□□ 1.96
ATP6V0A1Q93050 AC074183.2-201ENST00000623112 922 ntBASIC27.32■■□□□ 1.96
ATP6V0A1Q93050 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
ATP6V0A1Q93050 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC27.32■■□□□ 1.96
ATP6V0A1Q93050 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
ATP6V0A1Q93050 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
ATP6V0A1Q93050 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC27.31■■□□□ 1.96
ATP6V0A1Q93050 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC27.31■■□□□ 1.96
ATP6V0A1Q93050 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC27.31■■□□□ 1.96
ATP6V0A1Q93050 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC27.31■■□□□ 1.96
ATP6V0A1Q93050 AC139795.1-202ENST00000500444 432 ntBASIC27.31■■□□□ 1.96
ATP6V0A1Q93050 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC27.3■■□□□ 1.96
ATP6V0A1Q93050 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
ATP6V0A1Q93050 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC27.3■■□□□ 1.96
ATP6V0A1Q93050 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
ATP6V0A1Q93050 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC27.29■■□□□ 1.96
ATP6V0A1Q93050 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC27.29■■□□□ 1.96
ATP6V0A1Q93050 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC27.29■■□□□ 1.96
ATP6V0A1Q93050 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC27.29■■□□□ 1.96
ATP6V0A1Q93050 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC27.29■■□□□ 1.96
ATP6V0A1Q93050 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC27.29■■□□□ 1.96
ATP6V0A1Q93050 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC27.29■■□□□ 1.96
ATP6V0A1Q93050 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC27.28■■□□□ 1.96
ATP6V0A1Q93050 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
ATP6V0A1Q93050 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC27.28■■□□□ 1.96
ATP6V0A1Q93050 AL451085.2-201ENST00000605085 799 ntBASIC27.28■■□□□ 1.96
ATP6V0A1Q93050 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC27.28■■□□□ 1.96
ATP6V0A1Q93050 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
ATP6V0A1Q93050 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC27.27■■□□□ 1.96
ATP6V0A1Q93050 KRT8P33-201ENST00000508125 1423 ntBASIC27.27■■□□□ 1.96
ATP6V0A1Q93050 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
ATP6V0A1Q93050 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC27.27■■□□□ 1.96
ATP6V0A1Q93050 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC27.27■■□□□ 1.96
ATP6V0A1Q93050 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC27.26■■□□□ 1.95
ATP6V0A1Q93050 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
ATP6V0A1Q93050 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC27.26■■□□□ 1.95
ATP6V0A1Q93050 HYI-210ENST00000486909 905 ntTSL 5 BASIC27.26■■□□□ 1.95
ATP6V0A1Q93050 AL035685.1-201ENST00000636663 812 ntBASIC27.26■■□□□ 1.95
ATP6V0A1Q93050 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
ATP6V0A1Q93050 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
ATP6V0A1Q93050 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
ATP6V0A1Q93050 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC27.25■■□□□ 1.95
ATP6V0A1Q93050 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
ATP6V0A1Q93050 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
ATP6V0A1Q93050 BEX3-202ENST00000372634 753 ntTSL 2 BASIC27.24■■□□□ 1.95
ATP6V0A1Q93050 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC27.24■■□□□ 1.95
ATP6V0A1Q93050 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
Retrieved 100 of 98,524 protein–RNA pairs in 60.3 ms