Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC24.41■■□□□ 1.5
SLC44A1Q8WWI5 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC24.41■■□□□ 1.5
SLC44A1Q8WWI5 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
SLC44A1Q8WWI5 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
SLC44A1Q8WWI5 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
SLC44A1Q8WWI5 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC24.41■■□□□ 1.5
SLC44A1Q8WWI5 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC24.41■■□□□ 1.5
SLC44A1Q8WWI5 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
SLC44A1Q8WWI5 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
SLC44A1Q8WWI5 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC24.4■■□□□ 1.5
SLC44A1Q8WWI5 MED17-227ENST00000640521 2047 ntTSL 5 BASIC24.4■■□□□ 1.5
SLC44A1Q8WWI5 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC24.4■■□□□ 1.5
SLC44A1Q8WWI5 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
SLC44A1Q8WWI5 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
SLC44A1Q8WWI5 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
SLC44A1Q8WWI5 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC24.38■■□□□ 1.49
SLC44A1Q8WWI5 AC096887.2-201ENST00000623443 1957 ntBASIC24.37■■□□□ 1.49
SLC44A1Q8WWI5 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC24.37■■□□□ 1.49
SLC44A1Q8WWI5 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
SLC44A1Q8WWI5 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
SLC44A1Q8WWI5 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC24.37■■□□□ 1.49
SLC44A1Q8WWI5 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
SLC44A1Q8WWI5 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC24.36■■□□□ 1.49
SLC44A1Q8WWI5 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC24.36■■□□□ 1.49
SLC44A1Q8WWI5 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC24.36■■□□□ 1.49
SLC44A1Q8WWI5 LINC01971-201ENST00000617888 1048 ntBASIC24.36■■□□□ 1.49
SLC44A1Q8WWI5 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC24.36■■□□□ 1.49
SLC44A1Q8WWI5 AC022211.4-201ENST00000625094 2161 ntBASIC24.36■■□□□ 1.49
SLC44A1Q8WWI5 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC24.35■■□□□ 1.49
SLC44A1Q8WWI5 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC24.35■■□□□ 1.49
SLC44A1Q8WWI5 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
SLC44A1Q8WWI5 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
SLC44A1Q8WWI5 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
SLC44A1Q8WWI5 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
SLC44A1Q8WWI5 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
SLC44A1Q8WWI5 HGH1-207ENST00000628266 258 ntTSL 5 BASIC24.34■■□□□ 1.49
SLC44A1Q8WWI5 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC24.34■■□□□ 1.49
SLC44A1Q8WWI5 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC24.34■■□□□ 1.49
SLC44A1Q8WWI5 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
SLC44A1Q8WWI5 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC24.33■■□□□ 1.49
SLC44A1Q8WWI5 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
SLC44A1Q8WWI5 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC24.33■■□□□ 1.49
SLC44A1Q8WWI5 MIR219A2-201ENST00000608502 1504 ntBASIC24.33■■□□□ 1.49
SLC44A1Q8WWI5 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
SLC44A1Q8WWI5 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC24.33■■□□□ 1.48
SLC44A1Q8WWI5 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC24.32■■□□□ 1.48
SLC44A1Q8WWI5 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
SLC44A1Q8WWI5 AC138932.3-201ENST00000567634 1902 ntBASIC24.32■■□□□ 1.48
SLC44A1Q8WWI5 AC008813.1-201ENST00000536597 885 ntBASIC24.32■■□□□ 1.48
SLC44A1Q8WWI5 DUX4L13-201ENST00000554103 1267 ntBASIC24.32■■□□□ 1.48
SLC44A1Q8WWI5 DUX4L15-201ENST00000611059 1267 ntBASIC24.32■■□□□ 1.48
SLC44A1Q8WWI5 DUX4L23-201ENST00000615195 1269 ntBASIC24.32■■□□□ 1.48
SLC44A1Q8WWI5 DUX4L24-201ENST00000617576 1269 ntBASIC24.32■■□□□ 1.48
SLC44A1Q8WWI5 DUX4L22-201ENST00000618238 1269 ntBASIC24.32■■□□□ 1.48
SLC44A1Q8WWI5 DUX4L20-201ENST00000619712 1269 ntBASIC24.32■■□□□ 1.48
SLC44A1Q8WWI5 DUX4L21-201ENST00000622058 1269 ntBASIC24.32■■□□□ 1.48
SLC44A1Q8WWI5 DUX4L10-201ENST00000622460 1267 ntBASIC24.32■■□□□ 1.48
SLC44A1Q8WWI5 DUX4L25-201ENST00000624915 1269 ntBASIC24.32■■□□□ 1.48
SLC44A1Q8WWI5 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
SLC44A1Q8WWI5 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
SLC44A1Q8WWI5 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC24.31■■□□□ 1.48
SLC44A1Q8WWI5 AC148477.6-201ENST00000623746 465 ntBASIC24.31■■□□□ 1.48
SLC44A1Q8WWI5 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC24.3■■□□□ 1.48
SLC44A1Q8WWI5 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
SLC44A1Q8WWI5 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC24.3■■□□□ 1.48
SLC44A1Q8WWI5 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
SLC44A1Q8WWI5 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC24.29■■□□□ 1.48
SLC44A1Q8WWI5 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC24.29■■□□□ 1.48
SLC44A1Q8WWI5 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC24.29■■□□□ 1.48
SLC44A1Q8WWI5 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC24.29■■□□□ 1.48
SLC44A1Q8WWI5 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
SLC44A1Q8WWI5 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC24.29■■□□□ 1.48
SLC44A1Q8WWI5 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC24.29■■□□□ 1.48
SLC44A1Q8WWI5 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC24.28■■□□□ 1.48
SLC44A1Q8WWI5 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
SLC44A1Q8WWI5 CHST11-202ENST00000546689 756 ntTSL 2 BASIC24.28■■□□□ 1.48
SLC44A1Q8WWI5 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC24.28■■□□□ 1.48
SLC44A1Q8WWI5 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC24.28■■□□□ 1.48
SLC44A1Q8WWI5 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC24.27■■□□□ 1.48
SLC44A1Q8WWI5 AL139125.2-201ENST00000623134 1869 ntBASIC24.27■■□□□ 1.48
SLC44A1Q8WWI5 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC24.27■■□□□ 1.48
SLC44A1Q8WWI5 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
SLC44A1Q8WWI5 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC24.26■■□□□ 1.47
SLC44A1Q8WWI5 PREB-202ENST00000406567 1910 ntTSL 5 BASIC24.26■■□□□ 1.47
SLC44A1Q8WWI5 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC24.26■■□□□ 1.47
SLC44A1Q8WWI5 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
SLC44A1Q8WWI5 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
SLC44A1Q8WWI5 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
SLC44A1Q8WWI5 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
SLC44A1Q8WWI5 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
SLC44A1Q8WWI5 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC24.25■■□□□ 1.47
SLC44A1Q8WWI5 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
SLC44A1Q8WWI5 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
SLC44A1Q8WWI5 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC24.24■■□□□ 1.47
SLC44A1Q8WWI5 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC24.24■■□□□ 1.47
SLC44A1Q8WWI5 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC24.24■■□□□ 1.47
SLC44A1Q8WWI5 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
SLC44A1Q8WWI5 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC24.24■■□□□ 1.47
SLC44A1Q8WWI5 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
SLC44A1Q8WWI5 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms