Protein–RNA interactions for Protein: Q8NEP3

DNAAF1, Dynein assembly factor 1, axonemal, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF1Q8NEP3 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC21.24■□□□□ 0.99
DNAAF1Q8NEP3 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC21.24■□□□□ 0.99
DNAAF1Q8NEP3 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC21.24■□□□□ 0.99
DNAAF1Q8NEP3 CHML-204ENST00000638121 920 ntTSL 2 BASIC21.23■□□□□ 0.99
DNAAF1Q8NEP3 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
DNAAF1Q8NEP3 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
DNAAF1Q8NEP3 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
DNAAF1Q8NEP3 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
DNAAF1Q8NEP3 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
DNAAF1Q8NEP3 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
DNAAF1Q8NEP3 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
DNAAF1Q8NEP3 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
DNAAF1Q8NEP3 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
DNAAF1Q8NEP3 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC21.22■□□□□ 0.99
DNAAF1Q8NEP3 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
DNAAF1Q8NEP3 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
DNAAF1Q8NEP3 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
DNAAF1Q8NEP3 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC21.21■□□□□ 0.99
DNAAF1Q8NEP3 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
DNAAF1Q8NEP3 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC21.2■□□□□ 0.99
DNAAF1Q8NEP3 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
DNAAF1Q8NEP3 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
DNAAF1Q8NEP3 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
DNAAF1Q8NEP3 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
DNAAF1Q8NEP3 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
DNAAF1Q8NEP3 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
DNAAF1Q8NEP3 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC21.19■□□□□ 0.98
DNAAF1Q8NEP3 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
DNAAF1Q8NEP3 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
DNAAF1Q8NEP3 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
DNAAF1Q8NEP3 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
DNAAF1Q8NEP3 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
DNAAF1Q8NEP3 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
DNAAF1Q8NEP3 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
DNAAF1Q8NEP3 AC010501.1-201ENST00000606270 1962 ntBASIC21.18■□□□□ 0.98
DNAAF1Q8NEP3 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC21.18■□□□□ 0.98
DNAAF1Q8NEP3 DUX4L13-201ENST00000554103 1267 ntBASIC21.18■□□□□ 0.98
DNAAF1Q8NEP3 DUX4L15-201ENST00000611059 1267 ntBASIC21.18■□□□□ 0.98
DNAAF1Q8NEP3 DUX4L23-201ENST00000615195 1269 ntBASIC21.18■□□□□ 0.98
DNAAF1Q8NEP3 DUX4L24-201ENST00000617576 1269 ntBASIC21.18■□□□□ 0.98
DNAAF1Q8NEP3 DUX4L22-201ENST00000618238 1269 ntBASIC21.18■□□□□ 0.98
DNAAF1Q8NEP3 DUX4L20-201ENST00000619712 1269 ntBASIC21.18■□□□□ 0.98
DNAAF1Q8NEP3 DUX4L21-201ENST00000622058 1269 ntBASIC21.18■□□□□ 0.98
DNAAF1Q8NEP3 DUX4L10-201ENST00000622460 1267 ntBASIC21.18■□□□□ 0.98
DNAAF1Q8NEP3 DUX4L25-201ENST00000624915 1269 ntBASIC21.18■□□□□ 0.98
DNAAF1Q8NEP3 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC21.18■□□□□ 0.98
DNAAF1Q8NEP3 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
DNAAF1Q8NEP3 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
DNAAF1Q8NEP3 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
DNAAF1Q8NEP3 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
DNAAF1Q8NEP3 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
DNAAF1Q8NEP3 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
DNAAF1Q8NEP3 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC21.16■□□□□ 0.98
DNAAF1Q8NEP3 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC21.16■□□□□ 0.98
DNAAF1Q8NEP3 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
DNAAF1Q8NEP3 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
DNAAF1Q8NEP3 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
DNAAF1Q8NEP3 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
DNAAF1Q8NEP3 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
DNAAF1Q8NEP3 AC008813.1-201ENST00000536597 885 ntBASIC21.15■□□□□ 0.98
DNAAF1Q8NEP3 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
DNAAF1Q8NEP3 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
DNAAF1Q8NEP3 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
DNAAF1Q8NEP3 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
DNAAF1Q8NEP3 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
DNAAF1Q8NEP3 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
DNAAF1Q8NEP3 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
DNAAF1Q8NEP3 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
DNAAF1Q8NEP3 MLEC-202ENST00000412616 841 ntTSL 3 BASIC21.14■□□□□ 0.97
DNAAF1Q8NEP3 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC21.14■□□□□ 0.97
DNAAF1Q8NEP3 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
DNAAF1Q8NEP3 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
DNAAF1Q8NEP3 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
DNAAF1Q8NEP3 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
DNAAF1Q8NEP3 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
DNAAF1Q8NEP3 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
DNAAF1Q8NEP3 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC21.13■□□□□ 0.97
DNAAF1Q8NEP3 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
DNAAF1Q8NEP3 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
DNAAF1Q8NEP3 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC21.13■□□□□ 0.97
DNAAF1Q8NEP3 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
DNAAF1Q8NEP3 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
DNAAF1Q8NEP3 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC21.12■□□□□ 0.97
DNAAF1Q8NEP3 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC21.12■□□□□ 0.97
DNAAF1Q8NEP3 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
DNAAF1Q8NEP3 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC21.12■□□□□ 0.97
DNAAF1Q8NEP3 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
DNAAF1Q8NEP3 DUX4L11-201ENST00000611504 1267 ntBASIC21.11■□□□□ 0.97
DNAAF1Q8NEP3 DUX4L12-201ENST00000614593 1267 ntBASIC21.11■□□□□ 0.97
DNAAF1Q8NEP3 DUX4L14-201ENST00000621227 1267 ntBASIC21.11■□□□□ 0.97
DNAAF1Q8NEP3 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
DNAAF1Q8NEP3 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC21.11■□□□□ 0.97
DNAAF1Q8NEP3 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
DNAAF1Q8NEP3 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
DNAAF1Q8NEP3 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
DNAAF1Q8NEP3 MED17-227ENST00000640521 2047 ntTSL 5 BASIC21.1■□□□□ 0.97
DNAAF1Q8NEP3 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
DNAAF1Q8NEP3 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
DNAAF1Q8NEP3 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
DNAAF1Q8NEP3 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 128.3 ms