Protein–RNA interactions for Protein: Q8NCL8

TMEM116, Transmembrane protein 116, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116Q8NCL8 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TMEM116Q8NCL8 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TMEM116Q8NCL8 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TMEM116Q8NCL8 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TMEM116Q8NCL8 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC19.15■□□□□ 0.66
TMEM116Q8NCL8 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TMEM116Q8NCL8 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
TMEM116Q8NCL8 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC19.15■□□□□ 0.66
TMEM116Q8NCL8 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
TMEM116Q8NCL8 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC19.15■□□□□ 0.66
TMEM116Q8NCL8 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TMEM116Q8NCL8 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TMEM116Q8NCL8 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC19.14■□□□□ 0.66
TMEM116Q8NCL8 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TMEM116Q8NCL8 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TMEM116Q8NCL8 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC19.14■□□□□ 0.65
TMEM116Q8NCL8 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC19.14■□□□□ 0.65
TMEM116Q8NCL8 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
TMEM116Q8NCL8 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC19.14■□□□□ 0.65
TMEM116Q8NCL8 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
TMEM116Q8NCL8 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TMEM116Q8NCL8 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC19.13■□□□□ 0.65
TMEM116Q8NCL8 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC19.13■□□□□ 0.65
TMEM116Q8NCL8 AC148477.6-201ENST00000623746 465 ntBASIC19.13■□□□□ 0.65
TMEM116Q8NCL8 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TMEM116Q8NCL8 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC19.13■□□□□ 0.65
TMEM116Q8NCL8 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TMEM116Q8NCL8 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TMEM116Q8NCL8 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TMEM116Q8NCL8 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
TMEM116Q8NCL8 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
TMEM116Q8NCL8 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TMEM116Q8NCL8 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TMEM116Q8NCL8 HES6-205ENST00000409356 528 ntTSL 2 BASIC19.12■□□□□ 0.65
TMEM116Q8NCL8 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
TMEM116Q8NCL8 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
TMEM116Q8NCL8 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC19.11■□□□□ 0.65
TMEM116Q8NCL8 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC19.11■□□□□ 0.65
TMEM116Q8NCL8 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC19.11■□□□□ 0.65
TMEM116Q8NCL8 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
TMEM116Q8NCL8 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
TMEM116Q8NCL8 AC010501.1-201ENST00000606270 1962 ntBASIC19.11■□□□□ 0.65
TMEM116Q8NCL8 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC19.11■□□□□ 0.65
TMEM116Q8NCL8 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC19.11■□□□□ 0.65
TMEM116Q8NCL8 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TMEM116Q8NCL8 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
TMEM116Q8NCL8 MIR219A2-201ENST00000608502 1504 ntBASIC19.1■□□□□ 0.65
TMEM116Q8NCL8 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
TMEM116Q8NCL8 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TMEM116Q8NCL8 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TMEM116Q8NCL8 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TMEM116Q8NCL8 MIR7108-201ENST00000614319 87 ntBASIC19.1■□□□□ 0.65
TMEM116Q8NCL8 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TMEM116Q8NCL8 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
TMEM116Q8NCL8 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TMEM116Q8NCL8 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
TMEM116Q8NCL8 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TMEM116Q8NCL8 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TMEM116Q8NCL8 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC19.09■□□□□ 0.65
TMEM116Q8NCL8 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
TMEM116Q8NCL8 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
TMEM116Q8NCL8 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
TMEM116Q8NCL8 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TMEM116Q8NCL8 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TMEM116Q8NCL8 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
TMEM116Q8NCL8 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
TMEM116Q8NCL8 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TMEM116Q8NCL8 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC19.08■□□□□ 0.64
TMEM116Q8NCL8 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TMEM116Q8NCL8 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TMEM116Q8NCL8 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TMEM116Q8NCL8 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TMEM116Q8NCL8 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TMEM116Q8NCL8 MACF1-219ENST00000484793 834 ntTSL 2 BASIC19.07■□□□□ 0.64
TMEM116Q8NCL8 CR559946.2-201ENST00000623684 991 ntBASIC19.07■□□□□ 0.64
TMEM116Q8NCL8 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TMEM116Q8NCL8 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
TMEM116Q8NCL8 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
TMEM116Q8NCL8 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TMEM116Q8NCL8 GDI1-215ENST00000630693 786 ntTSL 4 BASIC19.06■□□□□ 0.64
TMEM116Q8NCL8 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TMEM116Q8NCL8 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TMEM116Q8NCL8 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TMEM116Q8NCL8 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TMEM116Q8NCL8 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TMEM116Q8NCL8 CHST11-203ENST00000547956 936 ntTSL 2 BASIC19.05■□□□□ 0.64
TMEM116Q8NCL8 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC19.05■□□□□ 0.64
TMEM116Q8NCL8 MIR3648-2-201ENST00000581792 180 ntBASIC19.05■□□□□ 0.64
TMEM116Q8NCL8 MIR3648-1-201ENST00000615959 180 ntBASIC19.05■□□□□ 0.64
TMEM116Q8NCL8 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC19.05■□□□□ 0.64
TMEM116Q8NCL8 ERN1-208ENST00000606895 2068 ntBASIC19.05■□□□□ 0.64
TMEM116Q8NCL8 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
TMEM116Q8NCL8 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TMEM116Q8NCL8 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TMEM116Q8NCL8 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC19.04■□□□□ 0.64
TMEM116Q8NCL8 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
TMEM116Q8NCL8 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
TMEM116Q8NCL8 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
TMEM116Q8NCL8 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TMEM116Q8NCL8 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms