Protein–RNA interactions for Protein: Q8N0S2

SYCE1, Synaptonemal complex central element protein 1, humanhuman

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCE1Q8N0S2 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC25.66■■□□□ 1.7
SYCE1Q8N0S2 AC093323.1-202ENST00000635031 2045 ntBASIC25.65■■□□□ 1.7
SYCE1Q8N0S2 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
SYCE1Q8N0S2 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC25.65■■□□□ 1.7
SYCE1Q8N0S2 DUX4L13-201ENST00000554103 1267 ntBASIC25.65■■□□□ 1.7
SYCE1Q8N0S2 DUX4L15-201ENST00000611059 1267 ntBASIC25.65■■□□□ 1.7
SYCE1Q8N0S2 DUX4L23-201ENST00000615195 1269 ntBASIC25.65■■□□□ 1.7
SYCE1Q8N0S2 DUX4L24-201ENST00000617576 1269 ntBASIC25.65■■□□□ 1.7
SYCE1Q8N0S2 DUX4L22-201ENST00000618238 1269 ntBASIC25.65■■□□□ 1.7
SYCE1Q8N0S2 DUX4L20-201ENST00000619712 1269 ntBASIC25.65■■□□□ 1.7
SYCE1Q8N0S2 DUX4L21-201ENST00000622058 1269 ntBASIC25.65■■□□□ 1.7
SYCE1Q8N0S2 DUX4L10-201ENST00000622460 1267 ntBASIC25.65■■□□□ 1.7
SYCE1Q8N0S2 DUX4L25-201ENST00000624915 1269 ntBASIC25.65■■□□□ 1.7
SYCE1Q8N0S2 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC25.65■■□□□ 1.7
SYCE1Q8N0S2 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC25.64■■□□□ 1.7
SYCE1Q8N0S2 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC25.64■■□□□ 1.7
SYCE1Q8N0S2 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC25.64■■□□□ 1.7
SYCE1Q8N0S2 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC25.64■■□□□ 1.69
SYCE1Q8N0S2 AC142381.3-201ENST00000568208 1670 ntBASIC25.64■■□□□ 1.69
SYCE1Q8N0S2 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
SYCE1Q8N0S2 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
SYCE1Q8N0S2 CHST11-202ENST00000546689 756 ntTSL 2 BASIC25.63■■□□□ 1.69
SYCE1Q8N0S2 AC148477.6-201ENST00000623746 465 ntBASIC25.63■■□□□ 1.69
SYCE1Q8N0S2 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC25.63■■□□□ 1.69
SYCE1Q8N0S2 MIR219A2-201ENST00000608502 1504 ntBASIC25.63■■□□□ 1.69
SYCE1Q8N0S2 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
SYCE1Q8N0S2 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
SYCE1Q8N0S2 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
SYCE1Q8N0S2 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC25.62■■□□□ 1.69
SYCE1Q8N0S2 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC25.62■■□□□ 1.69
SYCE1Q8N0S2 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
SYCE1Q8N0S2 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC25.62■■□□□ 1.69
SYCE1Q8N0S2 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC25.61■■□□□ 1.69
SYCE1Q8N0S2 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
SYCE1Q8N0S2 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
SYCE1Q8N0S2 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
SYCE1Q8N0S2 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC25.61■■□□□ 1.69
SYCE1Q8N0S2 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
SYCE1Q8N0S2 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC25.6■■□□□ 1.69
SYCE1Q8N0S2 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC25.6■■□□□ 1.69
SYCE1Q8N0S2 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC25.6■■□□□ 1.69
SYCE1Q8N0S2 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
SYCE1Q8N0S2 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
SYCE1Q8N0S2 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
SYCE1Q8N0S2 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC25.59■■□□□ 1.69
SYCE1Q8N0S2 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
SYCE1Q8N0S2 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC25.59■■□□□ 1.69
SYCE1Q8N0S2 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC25.59■■□□□ 1.69
SYCE1Q8N0S2 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
SYCE1Q8N0S2 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC25.59■■□□□ 1.69
SYCE1Q8N0S2 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
SYCE1Q8N0S2 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC25.57■■□□□ 1.68
SYCE1Q8N0S2 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
SYCE1Q8N0S2 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC25.57■■□□□ 1.68
SYCE1Q8N0S2 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC25.57■■□□□ 1.68
SYCE1Q8N0S2 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC25.56■■□□□ 1.68
SYCE1Q8N0S2 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC25.56■■□□□ 1.68
SYCE1Q8N0S2 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
SYCE1Q8N0S2 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
SYCE1Q8N0S2 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC25.56■■□□□ 1.68
SYCE1Q8N0S2 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
SYCE1Q8N0S2 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
SYCE1Q8N0S2 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
SYCE1Q8N0S2 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
SYCE1Q8N0S2 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC25.55■■□□□ 1.68
SYCE1Q8N0S2 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC25.55■■□□□ 1.68
SYCE1Q8N0S2 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
SYCE1Q8N0S2 AC096887.2-201ENST00000623443 1957 ntBASIC25.54■■□□□ 1.68
SYCE1Q8N0S2 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
SYCE1Q8N0S2 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
SYCE1Q8N0S2 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
SYCE1Q8N0S2 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
SYCE1Q8N0S2 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC25.53■■□□□ 1.68
SYCE1Q8N0S2 MED17-227ENST00000640521 2047 ntTSL 5 BASIC25.53■■□□□ 1.68
SYCE1Q8N0S2 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
SYCE1Q8N0S2 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC25.53■■□□□ 1.68
SYCE1Q8N0S2 DUX4L11-201ENST00000611504 1267 ntBASIC25.53■■□□□ 1.68
SYCE1Q8N0S2 DUX4L12-201ENST00000614593 1267 ntBASIC25.53■■□□□ 1.68
SYCE1Q8N0S2 DUX4L14-201ENST00000621227 1267 ntBASIC25.53■■□□□ 1.68
SYCE1Q8N0S2 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
SYCE1Q8N0S2 AL359258.2-201ENST00000564063 1566 ntBASIC25.52■■□□□ 1.68
SYCE1Q8N0S2 AC022211.4-201ENST00000625094 2161 ntBASIC25.52■■□□□ 1.68
SYCE1Q8N0S2 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC25.52■■□□□ 1.68
SYCE1Q8N0S2 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
SYCE1Q8N0S2 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC25.52■■□□□ 1.68
SYCE1Q8N0S2 CHST11-203ENST00000547956 936 ntTSL 2 BASIC25.52■■□□□ 1.68
SYCE1Q8N0S2 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC25.52■■□□□ 1.68
SYCE1Q8N0S2 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC25.52■■□□□ 1.68
SYCE1Q8N0S2 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
SYCE1Q8N0S2 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
SYCE1Q8N0S2 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
SYCE1Q8N0S2 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
SYCE1Q8N0S2 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
SYCE1Q8N0S2 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC25.51■■□□□ 1.67
SYCE1Q8N0S2 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
SYCE1Q8N0S2 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
SYCE1Q8N0S2 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
SYCE1Q8N0S2 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC25.5■■□□□ 1.67
SYCE1Q8N0S2 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
SYCE1Q8N0S2 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC25.5■■□□□ 1.67
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms