Protein–RNA interactions for Protein: Q8IX18

DHX40, Probable ATP-dependent RNA helicase DHX40, humanhuman

Known RBP Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DHX40Q8IX18 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC27.08■■□□□ 1.93
DHX40Q8IX18 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC27.08■■□□□ 1.93
DHX40Q8IX18 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC27.08■■□□□ 1.93
DHX40Q8IX18 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC27.08■■□□□ 1.93
DHX40Q8IX18 AC021231.2-201ENST00000594613 730 ntBASIC27.08■■□□□ 1.93
DHX40Q8IX18 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC27.08■■□□□ 1.93
DHX40Q8IX18 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
DHX40Q8IX18 PREB-202ENST00000406567 1910 ntTSL 5 BASIC27.08■■□□□ 1.93
DHX40Q8IX18 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC27.08■■□□□ 1.93
DHX40Q8IX18 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC27.08■■□□□ 1.92
DHX40Q8IX18 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
DHX40Q8IX18 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
DHX40Q8IX18 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
DHX40Q8IX18 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
DHX40Q8IX18 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
DHX40Q8IX18 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC27.06■■□□□ 1.92
DHX40Q8IX18 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC27.06■■□□□ 1.92
DHX40Q8IX18 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC27.06■■□□□ 1.92
DHX40Q8IX18 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC27.06■■□□□ 1.92
DHX40Q8IX18 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC27.06■■□□□ 1.92
DHX40Q8IX18 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
DHX40Q8IX18 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
DHX40Q8IX18 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
DHX40Q8IX18 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
DHX40Q8IX18 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
DHX40Q8IX18 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
DHX40Q8IX18 MIR7108-201ENST00000614319 87 ntBASIC27.05■■□□□ 1.92
DHX40Q8IX18 AC096887.2-201ENST00000623443 1957 ntBASIC27.05■■□□□ 1.92
DHX40Q8IX18 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
DHX40Q8IX18 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC27.05■■□□□ 1.92
DHX40Q8IX18 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
DHX40Q8IX18 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC27.05■■□□□ 1.92
DHX40Q8IX18 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC27.05■■□□□ 1.92
DHX40Q8IX18 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
DHX40Q8IX18 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC27.04■■□□□ 1.92
DHX40Q8IX18 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
DHX40Q8IX18 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
DHX40Q8IX18 AL139125.2-201ENST00000623134 1869 ntBASIC27.04■■□□□ 1.92
DHX40Q8IX18 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
DHX40Q8IX18 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC27.03■■□□□ 1.92
DHX40Q8IX18 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
DHX40Q8IX18 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC27.02■■□□□ 1.92
DHX40Q8IX18 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
DHX40Q8IX18 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC27.02■■□□□ 1.92
DHX40Q8IX18 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
DHX40Q8IX18 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
DHX40Q8IX18 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC27.02■■□□□ 1.92
DHX40Q8IX18 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC27.01■■□□□ 1.92
DHX40Q8IX18 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC27.01■■□□□ 1.91
DHX40Q8IX18 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC27.01■■□□□ 1.91
DHX40Q8IX18 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC27.01■■□□□ 1.91
DHX40Q8IX18 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC27.01■■□□□ 1.91
DHX40Q8IX18 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC27.01■■□□□ 1.91
DHX40Q8IX18 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
DHX40Q8IX18 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC27■■□□□ 1.91
DHX40Q8IX18 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
DHX40Q8IX18 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
DHX40Q8IX18 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC27■■□□□ 1.91
DHX40Q8IX18 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC27■■□□□ 1.91
DHX40Q8IX18 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
DHX40Q8IX18 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC27■■□□□ 1.91
DHX40Q8IX18 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
DHX40Q8IX18 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC26.98■■□□□ 1.91
DHX40Q8IX18 HGH1-207ENST00000628266 258 ntTSL 5 BASIC26.98■■□□□ 1.91
DHX40Q8IX18 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
DHX40Q8IX18 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC26.98■■□□□ 1.91
DHX40Q8IX18 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC26.97■■□□□ 1.91
DHX40Q8IX18 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC26.96■■□□□ 1.91
DHX40Q8IX18 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC26.96■■□□□ 1.91
DHX40Q8IX18 DUX4L29-201ENST00000425409 679 ntBASIC26.96■■□□□ 1.91
DHX40Q8IX18 ZNRF2P2-203ENST00000454624 420 ntBASIC26.96■■□□□ 1.91
DHX40Q8IX18 PVT1-219ENST00000523427 938 ntTSL 3 BASIC26.96■■□□□ 1.91
DHX40Q8IX18 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC26.96■■□□□ 1.91
DHX40Q8IX18 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
DHX40Q8IX18 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
DHX40Q8IX18 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC26.95■■□□□ 1.9
DHX40Q8IX18 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
DHX40Q8IX18 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC26.94■■□□□ 1.9
DHX40Q8IX18 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
DHX40Q8IX18 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
DHX40Q8IX18 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC26.94■■□□□ 1.9
DHX40Q8IX18 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
DHX40Q8IX18 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC26.93■■□□□ 1.9
DHX40Q8IX18 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
DHX40Q8IX18 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
DHX40Q8IX18 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC26.93■■□□□ 1.9
DHX40Q8IX18 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
DHX40Q8IX18 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC26.93■■□□□ 1.9
DHX40Q8IX18 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC26.92■■□□□ 1.9
DHX40Q8IX18 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
DHX40Q8IX18 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC26.92■■□□□ 1.9
DHX40Q8IX18 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC26.92■■□□□ 1.9
DHX40Q8IX18 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
DHX40Q8IX18 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC26.92■■□□□ 1.9
DHX40Q8IX18 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC26.92■■□□□ 1.9
DHX40Q8IX18 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
DHX40Q8IX18 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC26.92■■□□□ 1.9
DHX40Q8IX18 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
DHX40Q8IX18 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
DHX40Q8IX18 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC26.91■■□□□ 1.9
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms