Protein–RNA interactions for Protein: Q86YC2

PALB2, Partner and localizer of BRCA2, humanhuman

Predictions only

Length 1,186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2Q86YC2 SMPD5-203ENST00000639008 1464 ntBASIC26.57■■□□□ 1.84
PALB2Q86YC2 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC26.57■■□□□ 1.84
PALB2Q86YC2 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC26.57■■□□□ 1.84
PALB2Q86YC2 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC26.57■■□□□ 1.84
PALB2Q86YC2 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC26.57■■□□□ 1.84
PALB2Q86YC2 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
PALB2Q86YC2 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
PALB2Q86YC2 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC26.56■■□□□ 1.84
PALB2Q86YC2 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
PALB2Q86YC2 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC26.56■■□□□ 1.84
PALB2Q86YC2 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC26.56■■□□□ 1.84
PALB2Q86YC2 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC26.56■■□□□ 1.84
PALB2Q86YC2 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC26.56■■□□□ 1.84
PALB2Q86YC2 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
PALB2Q86YC2 AC133552.2-201ENST00000619106 1032 ntBASIC26.56■■□□□ 1.84
PALB2Q86YC2 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
PALB2Q86YC2 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
PALB2Q86YC2 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC26.54■■□□□ 1.84
PALB2Q86YC2 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC26.54■■□□□ 1.84
PALB2Q86YC2 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC26.54■■□□□ 1.84
PALB2Q86YC2 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
PALB2Q86YC2 AL592293.1-201ENST00000502889 1188 ntBASIC26.54■■□□□ 1.84
PALB2Q86YC2 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
PALB2Q86YC2 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC26.54■■□□□ 1.84
PALB2Q86YC2 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC26.54■■□□□ 1.84
PALB2Q86YC2 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC26.54■■□□□ 1.84
PALB2Q86YC2 AC009831.1-201ENST00000580420 1582 ntBASIC26.54■■□□□ 1.84
PALB2Q86YC2 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
PALB2Q86YC2 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC26.54■■□□□ 1.84
PALB2Q86YC2 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
PALB2Q86YC2 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
PALB2Q86YC2 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
PALB2Q86YC2 DUX4L18-201ENST00000553347 1267 ntBASIC26.52■■□□□ 1.84
PALB2Q86YC2 AC129492.7-201ENST00000622992 756 ntBASIC26.52■■□□□ 1.84
PALB2Q86YC2 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC26.51■■□□□ 1.83
PALB2Q86YC2 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
PALB2Q86YC2 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC26.51■■□□□ 1.83
PALB2Q86YC2 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
PALB2Q86YC2 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC26.51■■□□□ 1.83
PALB2Q86YC2 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
PALB2Q86YC2 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC26.5■■□□□ 1.83
PALB2Q86YC2 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
PALB2Q86YC2 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
PALB2Q86YC2 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
PALB2Q86YC2 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC26.49■■□□□ 1.83
PALB2Q86YC2 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC26.49■■□□□ 1.83
PALB2Q86YC2 CREM-210ENST00000374721 2020 ntTSL 5 BASIC26.49■■□□□ 1.83
PALB2Q86YC2 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
PALB2Q86YC2 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
PALB2Q86YC2 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC26.49■■□□□ 1.83
PALB2Q86YC2 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC26.48■■□□□ 1.83
PALB2Q86YC2 SHF-207ENST00000560540 2062 ntTSL 5 BASIC26.48■■□□□ 1.83
PALB2Q86YC2 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC26.48■■□□□ 1.83
PALB2Q86YC2 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC26.48■■□□□ 1.83
PALB2Q86YC2 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC26.47■■□□□ 1.83
PALB2Q86YC2 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC26.47■■□□□ 1.83
PALB2Q86YC2 RARRES2P1-201ENST00000474487 481 ntBASIC26.47■■□□□ 1.83
PALB2Q86YC2 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
PALB2Q86YC2 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC26.46■■□□□ 1.83
PALB2Q86YC2 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
PALB2Q86YC2 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC26.46■■□□□ 1.83
PALB2Q86YC2 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC26.46■■□□□ 1.83
PALB2Q86YC2 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC26.46■■□□□ 1.83
PALB2Q86YC2 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC26.45■■□□□ 1.83
PALB2Q86YC2 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
PALB2Q86YC2 AC026202.3-201ENST00000600805 1127 ntBASIC26.45■■□□□ 1.82
PALB2Q86YC2 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC26.45■■□□□ 1.82
PALB2Q86YC2 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC26.45■■□□□ 1.82
PALB2Q86YC2 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC26.44■■□□□ 1.82
PALB2Q86YC2 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC26.44■■□□□ 1.82
PALB2Q86YC2 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC26.44■■□□□ 1.82
PALB2Q86YC2 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
PALB2Q86YC2 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC26.43■■□□□ 1.82
PALB2Q86YC2 AP004609.3-201ENST00000610705 1884 ntBASIC26.43■■□□□ 1.82
PALB2Q86YC2 AC025884.2-201ENST00000553429 711 ntBASIC26.43■■□□□ 1.82
PALB2Q86YC2 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC26.43■■□□□ 1.82
PALB2Q86YC2 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC26.43■■□□□ 1.82
PALB2Q86YC2 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC26.43■■□□□ 1.82
PALB2Q86YC2 WHAMMP3-201ENST00000611636 1609 ntBASIC26.43■■□□□ 1.82
PALB2Q86YC2 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC26.42■■□□□ 1.82
PALB2Q86YC2 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
PALB2Q86YC2 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
PALB2Q86YC2 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC26.41■■□□□ 1.82
PALB2Q86YC2 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
PALB2Q86YC2 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC26.41■■□□□ 1.82
PALB2Q86YC2 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC26.4■■□□□ 1.82
PALB2Q86YC2 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC26.4■■□□□ 1.82
PALB2Q86YC2 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC26.4■■□□□ 1.82
PALB2Q86YC2 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC26.4■■□□□ 1.82
PALB2Q86YC2 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC26.4■■□□□ 1.82
PALB2Q86YC2 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
PALB2Q86YC2 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
PALB2Q86YC2 RP9P-202ENST00000450133 1212 ntBASIC26.39■■□□□ 1.82
PALB2Q86YC2 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC26.38■■□□□ 1.81
PALB2Q86YC2 AC091060.1-201ENST00000623524 1766 ntBASIC26.38■■□□□ 1.81
PALB2Q86YC2 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC26.38■■□□□ 1.81
PALB2Q86YC2 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
PALB2Q86YC2 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC26.38■■□□□ 1.81
PALB2Q86YC2 HES4-204ENST00000484667 667 ntTSL 3 BASIC26.38■■□□□ 1.81
PALB2Q86YC2 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC26.38■■□□□ 1.81
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms