Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
C11orf88Q6PI97 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
C11orf88Q6PI97 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
C11orf88Q6PI97 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
C11orf88Q6PI97 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
C11orf88Q6PI97 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC20.9■□□□□ 0.94
C11orf88Q6PI97 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
C11orf88Q6PI97 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
C11orf88Q6PI97 AGPS-202ENST00000409888 815 ntTSL 4 BASIC20.9■□□□□ 0.94
C11orf88Q6PI97 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC20.9■□□□□ 0.94
C11orf88Q6PI97 AC100797.4-201ENST00000631653 1827 ntBASIC20.9■□□□□ 0.94
C11orf88Q6PI97 DUSP8P4-201ENST00000399538 1761 ntBASIC20.9■□□□□ 0.94
C11orf88Q6PI97 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
C11orf88Q6PI97 THRA-202ENST00000394121 2260 ntTSL 2 BASIC20.89■□□□□ 0.94
C11orf88Q6PI97 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
C11orf88Q6PI97 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC20.89■□□□□ 0.93
C11orf88Q6PI97 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
C11orf88Q6PI97 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
C11orf88Q6PI97 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
C11orf88Q6PI97 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
C11orf88Q6PI97 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
C11orf88Q6PI97 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
C11orf88Q6PI97 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC20.88■□□□□ 0.93
C11orf88Q6PI97 RARA-203ENST00000394086 2008 ntTSL 2 BASIC20.88■□□□□ 0.93
C11orf88Q6PI97 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
C11orf88Q6PI97 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
C11orf88Q6PI97 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC20.87■□□□□ 0.93
C11orf88Q6PI97 LINC01971-201ENST00000617888 1048 ntBASIC20.87■□□□□ 0.93
C11orf88Q6PI97 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
C11orf88Q6PI97 AC092803.2-201ENST00000564287 1899 ntBASIC20.87■□□□□ 0.93
C11orf88Q6PI97 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
C11orf88Q6PI97 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
C11orf88Q6PI97 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC20.86■□□□□ 0.93
C11orf88Q6PI97 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC20.86■□□□□ 0.93
C11orf88Q6PI97 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
C11orf88Q6PI97 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
C11orf88Q6PI97 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
C11orf88Q6PI97 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
C11orf88Q6PI97 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
C11orf88Q6PI97 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC20.85■□□□□ 0.93
C11orf88Q6PI97 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
C11orf88Q6PI97 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
C11orf88Q6PI97 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC20.85■□□□□ 0.93
C11orf88Q6PI97 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
C11orf88Q6PI97 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC20.85■□□□□ 0.93
C11orf88Q6PI97 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
C11orf88Q6PI97 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
C11orf88Q6PI97 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
C11orf88Q6PI97 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
C11orf88Q6PI97 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
C11orf88Q6PI97 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
C11orf88Q6PI97 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC20.84■□□□□ 0.93
C11orf88Q6PI97 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.83■□□□□ 0.93
C11orf88Q6PI97 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
C11orf88Q6PI97 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
C11orf88Q6PI97 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
C11orf88Q6PI97 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC20.83■□□□□ 0.93
C11orf88Q6PI97 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
C11orf88Q6PI97 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
C11orf88Q6PI97 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
C11orf88Q6PI97 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
C11orf88Q6PI97 MIR639-201ENST00000384974 98 ntBASIC20.82■□□□□ 0.92
C11orf88Q6PI97 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
C11orf88Q6PI97 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
C11orf88Q6PI97 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
C11orf88Q6PI97 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
C11orf88Q6PI97 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC20.81■□□□□ 0.92
C11orf88Q6PI97 AC018358.1-201ENST00000631079 1402 ntBASIC20.81■□□□□ 0.92
C11orf88Q6PI97 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
C11orf88Q6PI97 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC20.81■□□□□ 0.92
C11orf88Q6PI97 RNF166-209ENST00000567844 633 ntTSL 5 BASIC20.81■□□□□ 0.92
C11orf88Q6PI97 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
C11orf88Q6PI97 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
C11orf88Q6PI97 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
C11orf88Q6PI97 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
C11orf88Q6PI97 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
C11orf88Q6PI97 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC20.8■□□□□ 0.92
C11orf88Q6PI97 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
C11orf88Q6PI97 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
C11orf88Q6PI97 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
C11orf88Q6PI97 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
C11orf88Q6PI97 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
C11orf88Q6PI97 MIR4449-201ENST00000578365 66 ntBASIC20.79■□□□□ 0.92
C11orf88Q6PI97 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
C11orf88Q6PI97 CEBPA-AS1-201ENST00000592982 2198 ntBASIC20.78■□□□□ 0.92
C11orf88Q6PI97 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
C11orf88Q6PI97 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
C11orf88Q6PI97 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
C11orf88Q6PI97 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
C11orf88Q6PI97 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
C11orf88Q6PI97 EI24-212ENST00000615917 1407 ntTSL 2 BASIC20.78■□□□□ 0.92
C11orf88Q6PI97 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
C11orf88Q6PI97 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
C11orf88Q6PI97 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
C11orf88Q6PI97 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
C11orf88Q6PI97 DUX4L11-201ENST00000611504 1267 ntBASIC20.77■□□□□ 0.92
C11orf88Q6PI97 DUX4L12-201ENST00000614593 1267 ntBASIC20.77■□□□□ 0.92
C11orf88Q6PI97 DUX4L14-201ENST00000621227 1267 ntBASIC20.77■□□□□ 0.92
C11orf88Q6PI97 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
C11orf88Q6PI97 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.77■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms